Gene detail information of Glyur003262s00037817 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G25830.1 | 3.00E-65 | terpene synthase-like sequence-1,8-cineole |
| NR | KEH38237.1 | 2.33E-133 | monoterpene synthase [Medicago truncatula] |
| Swissprot | tr|B9T536|TPS10_RICCO | 3.00E-100 | Terpene synthase 10 |
| trEMBL | tr|A0A072V8U9|A0A072V8U9_MEDTR | 9.00E-134 | Monoterpene synthase {ECO:0000313|EMBL:KEH38237.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03262 | 22877 | 25896 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003262s00037817.1 | PF03936.11 | Terpene_synth_C | 2 | 222 | 5.80E-66 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 81.383 |
| SRR1783600 | control | 80.918 |
| SRR1783602 | moderate drought stress | 201.016 |
| SRR1811619 | moderate drought stress | 191.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.986 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.702 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.277 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.372 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.179 |
| SRR2868004 | Drought Stress (root) | 4.867 |
| SRR2967015 | Control (root) | 4.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.715 |
| SRR9715740 | Leaf | 9.236 |
| SRR9715741 | Leaf | 0.582 |
| SRR9715739 | Root | 11.811 |
| SRR9715742 | Root | 57.413 |
| SRR9715743 | Root | 52.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.175 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 75.731 |
| SRR8400027 | Control - Root | 19.473 |