Gene detail information of Glyur003260s00040520 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G33390.1 | 4.00E-14 | |
| NR | AFK34388.1 | 7.66E-38 | unknown [Lotus japonicus] |
| trEMBL | tr|I3S296|I3S296_LOTJA | 3.00E-38 | Uncharacterized protein {ECO:0000313|EMBL:AFK34388.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03260 | 1223 | 3311 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.368 |
| SRR1783600 | control | 2.660 |
| SRR1783602 | moderate drought stress | 2.693 |
| SRR1811619 | moderate drought stress | 2.850 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.211 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.490 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.225 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.354 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.799 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.382 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.218 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.501 |
| SRR2868004 | Drought Stress (root) | 14.644 |
| SRR2967015 | Control (root) | 14.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.602 |
| SRR9715740 | Leaf | 12.616 |
| SRR9715741 | Leaf | 16.129 |
| SRR9715739 | Root | 3.472 |
| SRR9715742 | Root | 7.476 |
| SRR9715743 | Root | 6.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.828 |
| SRR8749028 | MeJA induced 9h | 6.349 |
| SRR8749029 | MeJA induced 9h | 4.710 |
| SRR8749030 | Uninduced | 4.780 |
| SRR8749031 | Uninduced | 2.536 |
| SRR8749032 | Uninduced | 2.417 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.177 |
| SRR8400027 | Control - Root | 11.902 |