Gene detail information of Glyur003259s00040504 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004497617.1 | 0 | PREDICTED: protein ROS1-like [Cicer arietinum] |
| trEMBL | tr|A0A072VJ84|A0A072VJ84_MEDTR | 0 | Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:KEH42104.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03259 | 3243 | 8699 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.470 |
| SRR1783600 | control | 3.640 |
| SRR1783602 | moderate drought stress | 10.323 |
| SRR1811619 | moderate drought stress | 10.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.962 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.896 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.330 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.364 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.687 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.574 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.341 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.852 |
| SRR2868004 | Drought Stress (root) | 2.825 |
| SRR2967015 | Control (root) | 2.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.317 |
| SRR9715740 | Leaf | 0.115 |
| SRR9715741 | Leaf | 0.132 |
| SRR9715739 | Root | 0.037 |
| SRR9715742 | Root | 0.175 |
| SRR9715743 | Root | 0.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.937 |
| SRR8749028 | MeJA induced 9h | 2.407 |
| SRR8749029 | MeJA induced 9h | 0.440 |
| SRR8749030 | Uninduced | 0.296 |
| SRR8749031 | Uninduced | 0.811 |
| SRR8749032 | Uninduced | 0.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.973 |
| SRR8400027 | Control - Root | 1.709 |