Gene detail information of Glyur003249s00039256.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G53530.18.00E-52Peptidase S24/S26A/S26B/S26C family protein
NRXP_004488670.15.34E-85PREDICTED: mitochondrial inner membrane protease subunit 1-like isoform X1 [Cicer arietinum]
COGYP_076274.13.00E-13signal peptidase I [Symbiobacterium thermophilum IAM 14863]
Swissprottr|Q9M9Z2|TPP2_ARATH7.00E-08Probable thylakoidal processing peptidase 2, chloroplastic (Precursor)
trEMBLtr|I1M2T2|I1M2T2_SOYBN5.00E-85Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G33660.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold0324912685144-


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K09647IMP1EC:3.4.21.-Protein exportmap03060
Protein exportmap03060


Gene Ontology

biological_process

GO:0006508  proteolysis

GO:0006627  protein processing involved in protein targeting to mitochondrion


cellular_component

GO:0016020  membrane


molecular_function

GO:0008233  peptidase activity

GO:0008236  serine-type peptidase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003249s00039256.2PF00717.18Peptidase_S24661274.30E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.223
SRR1783600control7.956
SRR1783602moderate drought stress5.962
SRR1811619moderate drought stress6.161

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.589
DRR006520Root Summer glycyrrhizin high producing strain7.689
DRR006521Root Winter glycyrrhizin high producing strain7.002
DRR006522Root Winter glycyrrhizin high producing strain7.949
DRR006523Root Summer glycyrrhizin low producing strain6.409
DRR006524Root Summer glycyrrhizin low producing strain6.602
DRR006525Leaf Summer glycyrrhizin high producing strain2.102
DRR006526Leaf Summer glycyrrhizin high producing strain2.090

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)9.101
SRR2868004Drought Stress (root)7.041
SRR2967015Control (root)6.825

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf3.060
SRR9715740Leaf4.912
SRR9715741Leaf4.739
SRR9715739Root5.106
SRR9715742Root4.909
SRR9715743Root5.124

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.038
SRR8749028MeJA induced 9h3.484
SRR8749029MeJA induced 9h4.029
SRR8749030Uninduced1.485
SRR8749031Uninduced0.188
SRR8749032Uninduced0.851

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root9.025
SRR8400027Control - Root9.039

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved