Gene detail information of Glyur003226s00042849 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G19990.1 | 5.00E-66 | |
| NR | AGV54157.1 | 7.29E-85 | hypothetical protein [Phaseolus vulgaris] |
| trEMBL | tr|T2DMX6|T2DMX6_PHAVU | 3.00E-85 | Uncharacterized protein {ECO:0000313|EMBL:AGV54157.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03226 | 17251 | 17739 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 35.242 |
| SRR1783600 | control | 35.927 |
| SRR1783602 | moderate drought stress | 109.549 |
| SRR1811619 | moderate drought stress | 109.030 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 77.181 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 78.172 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 46.574 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 45.145 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 405.731 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 410.217 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 33.136 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 32.766 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.207 |
| SRR2868004 | Drought Stress (root) | 13.692 |
| SRR2967015 | Control (root) | 14.760 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 76.753 |
| SRR9715740 | Leaf | 41.778 |
| SRR9715741 | Leaf | 109.234 |
| SRR9715739 | Root | 64.614 |
| SRR9715742 | Root | 138.056 |
| SRR9715743 | Root | 122.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.753 |
| SRR8749028 | MeJA induced 9h | 49.382 |
| SRR8749029 | MeJA induced 9h | 32.664 |
| SRR8749030 | Uninduced | 39.768 |
| SRR8749031 | Uninduced | 14.497 |
| SRR8749032 | Uninduced | 24.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.695 |
| SRR8400027 | Control - Root | 16.988 |