Gene detail information of Glyur003222s00038189 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003544292.2 | 5.03E-25 | PREDICTED: vacuolar cation/proton exchanger 3-like [Glycine max] |
| Swissprot | tr|Q945S5|CAX4_ARATH | 2.00E-11 | Vacuolar cation/proton exchanger 4 |
| trEMBL | tr|I1MBA7|I1MBA7_SOYBN | 2.00E-25 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G37250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03222 | 26468 | 26806 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.894 |
| SRR1783600 | control | 5.799 |
| SRR1783602 | moderate drought stress | 6.416 |
| SRR1811619 | moderate drought stress | 5.758 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.480 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.497 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.883 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.705 |
| SRR9715740 | Leaf | 9.026 |
| SRR9715741 | Leaf | 2.601 |
| SRR9715739 | Root | 4.997 |
| SRR9715742 | Root | 5.474 |
| SRR9715743 | Root | 3.614 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.504 |
| SRR8400027 | Control - Root | 0.276 |