Gene detail information of Glyur003218s00044439 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12170.1 | 7.00E-32 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_003554185.1 | 1.51E-44 | PREDICTED: chaperone protein dnaJ 6-like [Glycine max] |
| Swissprot | tr|Q9FL54|DNAJ6_ARATH | 1.00E-34 | Chaperone protein dnaJ 6 |
| trEMBL | tr|K7MYE0|K7MYE0_SOYBN | 2.00E-45 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G32480.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03218 | 11554 | 12837 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.919 |
| SRR1783600 | control | 1.800 |
| SRR1783602 | moderate drought stress | 2.758 |
| SRR1811619 | moderate drought stress | 2.713 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.540 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.763 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.895 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.527 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.706 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.513 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.773 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.527 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.878 |
| SRR2868004 | Drought Stress (root) | 6.451 |
| SRR2967015 | Control (root) | 6.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.237 |
| SRR9715740 | Leaf | 2.732 |
| SRR9715741 | Leaf | 1.739 |
| SRR9715739 | Root | 0.252 |
| SRR9715742 | Root | 0.501 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.554 |
| SRR8749028 | MeJA induced 9h | 6.961 |
| SRR8749029 | MeJA induced 9h | 3.493 |
| SRR8749030 | Uninduced | 3.842 |
| SRR8749031 | Uninduced | 5.558 |
| SRR8749032 | Uninduced | 3.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.120 |
| SRR8400027 | Control - Root | 4.708 |