Gene detail information of Glyur003210s00041944 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G54085.2 | 2.00E-07 | Yos1-like protein |
| NR | KHN17861.1 | 3.46E-25 | Immediate early response 3-interacting protein 1 [Glycine soja] |
| trEMBL | tr|I1LMM1|I1LMM1_SOYBN | 3.00E-25 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G34790.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03210 | 225 | 1311 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003210s00041944.1 | PF08571.5 | Yos1 | 31 | 74 | 7.50E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.515 |
| SRR1783600 | control | 2.648 |
| SRR1783602 | moderate drought stress | 0.797 |
| SRR1811619 | moderate drought stress | 0.448 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.450 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.861 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.003 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.113 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.485 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.246 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.938 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.320 |
| SRR2868004 | Drought Stress (root) | 2.071 |
| SRR2967015 | Control (root) | 2.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.377 |
| SRR9715740 | Leaf | 0.852 |
| SRR9715741 | Leaf | 0.357 |
| SRR9715739 | Root | 0.732 |
| SRR9715742 | Root | 1.002 |
| SRR9715743 | Root | 0.599 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.675 |
| SRR8749028 | MeJA induced 9h | 4.001 |
| SRR8749029 | MeJA induced 9h | 4.338 |
| SRR8749030 | Uninduced | 1.125 |
| SRR8749031 | Uninduced | 0.231 |
| SRR8749032 | Uninduced | 1.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.233 |
| SRR8400027 | Control - Root | 4.783 |