Gene detail information of Glyur003208s00043984 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003552070.1 | 9.31E-36 | PREDICTED: uncharacterized protein At5g48480-like [Glycine max] |
| COG | YP_004493697.1 | 6.00E-07 | glyoxalase family protein [Amycolicicoccus subflavus DQS3-9A1] |
| trEMBL | tr|I1N1R1|I1N1R1_SOYBN | 3.00E-36 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G25820.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03208 | 447 | 665 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.617 |
| SRR1783600 | control | 13.661 |
| SRR1783602 | moderate drought stress | 12.289 |
| SRR1811619 | moderate drought stress | 12.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.772 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.259 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.370 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.983 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.892 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.133 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.085 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 157.731 |
| SRR2868004 | Drought Stress (root) | 107.576 |
| SRR2967015 | Control (root) | 104.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 36.825 |
| SRR9715740 | Leaf | 8.213 |
| SRR9715741 | Leaf | 33.215 |
| SRR9715739 | Root | 42.138 |
| SRR9715742 | Root | 74.829 |
| SRR9715743 | Root | 58.129 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 42.766 |
| SRR8749028 | MeJA induced 9h | 14.056 |
| SRR8749029 | MeJA induced 9h | 21.535 |
| SRR8749030 | Uninduced | 1.654 |
| SRR8749031 | Uninduced | 0.321 |
| SRR8749032 | Uninduced | 3.734 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 42.605 |
| SRR8400027 | Control - Root | 34.383 |