Gene detail information of Glyur003192s00037965 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G53670.2 | 1.00E-05 | |
| NR | XP_004495014.1 | 2.32E-113 | PREDICTED: uncharacterized protein LOC101502221 [Cicer arietinum] |
| trEMBL | tr|G7ZZJ2|G7ZZJ2_MEDTR | 2.00E-104 | Uncharacterized protein {ECO:0000313|EMBL:KEH42363.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03192 | 23492 | 27214 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 81.819 |
| SRR1783600 | control | 80.803 |
| SRR1783602 | moderate drought stress | 59.108 |
| SRR1811619 | moderate drought stress | 59.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 166.097 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 163.810 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 72.598 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 71.327 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 166.456 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 166.915 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 48.450 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 46.623 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 57.452 |
| SRR2868004 | Drought Stress (root) | 110.070 |
| SRR2967015 | Control (root) | 122.331 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 175.642 |
| SRR9715740 | Leaf | 145.157 |
| SRR9715741 | Leaf | 202.879 |
| SRR9715739 | Root | 9.274 |
| SRR9715742 | Root | 53.077 |
| SRR9715743 | Root | 45.838 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 247.608 |
| SRR8749028 | MeJA induced 9h | 436.025 |
| SRR8749029 | MeJA induced 9h | 390.988 |
| SRR8749030 | Uninduced | 349.275 |
| SRR8749031 | Uninduced | 969.333 |
| SRR8749032 | Uninduced | 514.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 92.359 |
| SRR8400027 | Control - Root | 94.098 |