Gene detail information of Glyur003192s00037962 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G62450.1 | 9.00E-09 | |
| NR | KHN05926.1 | 2.36E-13 | hypothetical protein glysoja_026514, partial [Glycine soja] |
| trEMBL | tr|K7LZH7|K7LZH7_SOYBN | 3.00E-16 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G19490.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03192 | 10843 | 12829 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.337 |
| SRR1783600 | control | 6.285 |
| SRR1783602 | moderate drought stress | 5.207 |
| SRR1811619 | moderate drought stress | 5.448 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.121 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.719 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 24.364 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.787 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.148 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.174 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.333 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.700 |
| SRR2868004 | Drought Stress (root) | 19.800 |
| SRR2967015 | Control (root) | 16.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.295 |
| SRR9715740 | Leaf | 3.956 |
| SRR9715741 | Leaf | 4.369 |
| SRR9715739 | Root | 12.033 |
| SRR9715742 | Root | 6.696 |
| SRR9715743 | Root | 9.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.905 |
| SRR8749028 | MeJA induced 9h | 11.420 |
| SRR8749029 | MeJA induced 9h | 17.067 |
| SRR8749030 | Uninduced | 7.563 |
| SRR8749031 | Uninduced | 8.522 |
| SRR8749032 | Uninduced | 9.992 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.916 |
| SRR8400027 | Control - Root | 30.259 |