Gene detail information of Glyur003169s00037738 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39170.1 | 4.00E-45 | |
| NR | KEH41427.1 | 6.84E-117 | hypothetical protein MTR_1g050538 [Medicago truncatula] |
| trEMBL | tr|A0A072VI18|A0A072VI18_MEDTR | 3.00E-117 | Uncharacterized protein {ECO:0000313|EMBL:KEH41427.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03169 | 21487 | 22203 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003169s00037738.1 | PF10167.4 | NEP | 1 | 110 | 4.30E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.780 |
| SRR1783600 | control | 1.789 |
| SRR1783602 | moderate drought stress | 1.750 |
| SRR1811619 | moderate drought stress | 1.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.887 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.175 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.736 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.733 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.550 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.974 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.176 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.028 |
| SRR2868004 | Drought Stress (root) | 4.806 |
| SRR2967015 | Control (root) | 4.258 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.360 |
| SRR9715740 | Leaf | 2.998 |
| SRR9715741 | Leaf | 1.281 |
| SRR9715739 | Root | 0.225 |
| SRR9715742 | Root | 0.905 |
| SRR9715743 | Root | 0.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.956 |
| SRR8749028 | MeJA induced 9h | 3.276 |
| SRR8749029 | MeJA induced 9h | 3.326 |
| SRR8749030 | Uninduced | 3.821 |
| SRR8749031 | Uninduced | 4.792 |
| SRR8749032 | Uninduced | 4.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.832 |
| SRR8400027 | Control - Root | 4.865 |