Gene detail information of Glyur003169s00037733 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G10410.1 | 3.00E-69 | SERINE CARBOXYPEPTIDASE-LIKE 49 |
| NR | Q41005.1 | 3.06E-106 | RecName: Full=Serine carboxypeptidase-like, partial [Pisum sativum] |
| Swissprot | tr|Q41005|CBPX_PEA | 1.00E-108 | Serine carboxypeptidase-like (Fragment) |
| trEMBL | tr|Q9M450|Q9M450_CICAR | 2.00E-106 | Carboxypeptidase {ECO:0000256|RuleBase:RU361156} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03169 | 4 | 4848 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003169s00037733.1 | PF00450.17 | Peptidase_S10 | 23 | 168 | 2.00E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.500 |
| SRR1783600 | control | 3.966 |
| SRR1783602 | moderate drought stress | 4.032 |
| SRR1811619 | moderate drought stress | 3.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 33.960 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 35.025 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.446 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.074 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.879 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 27.835 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.028 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.832 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.649 |
| SRR2868004 | Drought Stress (root) | 9.443 |
| SRR2967015 | Control (root) | 5.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.709 |
| SRR9715740 | Leaf | 3.148 |
| SRR9715741 | Leaf | 5.781 |
| SRR9715739 | Root | 4.759 |
| SRR9715742 | Root | 5.037 |
| SRR9715743 | Root | 4.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.171 |
| SRR8749028 | MeJA induced 9h | 7.926 |
| SRR8749029 | MeJA induced 9h | 9.122 |
| SRR8749030 | Uninduced | 6.669 |
| SRR8749031 | Uninduced | 2.339 |
| SRR8749032 | Uninduced | 6.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.909 |
| SRR8400027 | Control - Root | 15.441 |