Gene detail information of Glyur003164s00038815 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | NP_001235603.1 | 1.68E-51 | uncharacterized protein LOC100500525 [Glycine max] |
| Swissprot | tr|P93333|PR101_MEDTR | 4.00E-49 | Class-10 pathogenesis-related protein 1 |
| trEMBL | tr|C6T206|C6T206_SOYBN | 6.00E-52 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU15628.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03164 | 5109 | 5414 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003164s00038815.1 | PF00407.14 | Bet_v_1 | 3 | 97 | 1.20E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1337.993 |
| SRR1783600 | control | 459.863 |
| SRR1783602 | moderate drought stress | 927.892 |
| SRR1811619 | moderate drought stress | 995.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 368.485 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 367.716 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8988.761 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6612.040 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 147.061 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 194.892 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 27.798 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 28.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2648.799 |
| SRR2868004 | Drought Stress (root) | 5922.264 |
| SRR2967015 | Control (root) | 3336.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1348.300 |
| SRR9715740 | Leaf | 238.147 |
| SRR9715741 | Leaf | 1123.844 |
| SRR9715739 | Root | 3003.646 |
| SRR9715742 | Root | 2316.388 |
| SRR9715743 | Root | 2819.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1831.027 |
| SRR8749028 | MeJA induced 9h | 2655.238 |
| SRR8749029 | MeJA induced 9h | 3478.436 |
| SRR8749030 | Uninduced | 5346.840 |
| SRR8749031 | Uninduced | 4433.440 |
| SRR8749032 | Uninduced | 5784.453 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4245.579 |
| SRR8400027 | Control - Root | 2021.796 |