Gene detail information of Glyur003164s00038814 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G45860.1 | 2.00E-04 | PYR1-like 11 |
| NR | XP_003594836.1 | 4.73E-75 | Disease resistance response protein Pi49 [Medicago truncatula] |
| Swissprot | tr|P93333|PR101_MEDTR | 2.00E-52 | Class-10 pathogenesis-related protein 1 |
| trEMBL | tr|G7IMZ2|G7IMZ2_MEDTR | 2.00E-75 | Uncharacterized protein {ECO:0000313|EMBL:AFK39187.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03164 | 1921 | 3028 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003164s00038814.1 | PF00407.14 | Bet_v_1 | 1 | 135 | 5.50E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 241.004 |
| SRR1783600 | control | 225.555 |
| SRR1783602 | moderate drought stress | 119.452 |
| SRR1811619 | moderate drought stress | 112.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.928 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.299 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.332 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.934 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.400 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.769 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 26.091 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.970 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 255.326 |
| SRR2868004 | Drought Stress (root) | 331.771 |
| SRR2967015 | Control (root) | 221.335 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 79.080 |
| SRR9715740 | Leaf | 34.888 |
| SRR9715741 | Leaf | 137.199 |
| SRR9715739 | Root | 251.878 |
| SRR9715742 | Root | 172.458 |
| SRR9715743 | Root | 173.284 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 57.681 |
| SRR8749028 | MeJA induced 9h | 44.638 |
| SRR8749029 | MeJA induced 9h | 33.015 |
| SRR8749030 | Uninduced | 309.706 |
| SRR8749031 | Uninduced | 49.943 |
| SRR8749032 | Uninduced | 35.416 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 288.408 |
| SRR8400027 | Control - Root | 201.264 |