Gene detail information of Glyur003157s00042086 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68580.2 | 1.00E-129 | agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein |
| NR | XP_004513702.1 | 0 | PREDICTED: uncharacterized protein LOC101510997 [Cicer arietinum] |
| trEMBL | tr|K7K2M6|K7K2M6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G20775.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03157 | 18342 | 22179 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003157s00042086.1 | PF01426.13 | BAH | 280 | 387 | 4.00E-11 |
| Glyur003157s00042086.1 | PF05641.7 | Agenet | 507 | 585 | 4.80E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.029 |
| SRR1783600 | control | 20.227 |
| SRR1783602 | moderate drought stress | 23.203 |
| SRR1811619 | moderate drought stress | 23.231 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 38.096 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 38.118 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 22.329 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.609 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 48.632 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 48.805 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.089 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.060 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 42.696 |
| SRR2868004 | Drought Stress (root) | 62.590 |
| SRR2967015 | Control (root) | 73.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 86.449 |
| SRR9715740 | Leaf | 86.977 |
| SRR9715741 | Leaf | 136.787 |
| SRR9715739 | Root | 28.197 |
| SRR9715742 | Root | 50.899 |
| SRR9715743 | Root | 47.822 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 77.756 |
| SRR8749028 | MeJA induced 9h | 95.338 |
| SRR8749029 | MeJA induced 9h | 93.736 |
| SRR8749030 | Uninduced | 92.231 |
| SRR8749031 | Uninduced | 188.993 |
| SRR8749032 | Uninduced | 97.362 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.191 |
| SRR8400027 | Control - Root | 49.871 |