Gene detail information of Glyur003157s00042085 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68585.1 | 2.00E-15 | |
| NR | XP_003614537.1 | 1.97E-47 | hypothetical protein MTR_5g055200 [Medicago truncatula] |
| trEMBL | tr|G7JZF0|G7JZF0_MEDTR | 7.00E-48 | Uncharacterized protein {ECO:0000313|EMBL:AES97495.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03157 | 13159 | 14886 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003157s00042085.1 | PF00403.21 | HMA | 38 | 77 | 2.80E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.785 |
| SRR1783600 | control | 16.011 |
| SRR1783602 | moderate drought stress | 8.129 |
| SRR1811619 | moderate drought stress | 8.256 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.314 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.243 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.604 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.850 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.903 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.658 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.786 |
| SRR2868004 | Drought Stress (root) | 23.940 |
| SRR2967015 | Control (root) | 23.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.873 |
| SRR9715740 | Leaf | 2.040 |
| SRR9715741 | Leaf | 3.564 |
| SRR9715739 | Root | 0.939 |
| SRR9715742 | Root | 14.805 |
| SRR9715743 | Root | 8.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.453 |
| SRR8749028 | MeJA induced 9h | 4.173 |
| SRR8749029 | MeJA induced 9h | 1.461 |
| SRR8749030 | Uninduced | 1.801 |
| SRR8749031 | Uninduced | 4.466 |
| SRR8749032 | Uninduced | 5.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 46.739 |
| SRR8400027 | Control - Root | 74.288 |