Gene detail information of Glyur003157s00042084 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G25855.1 | 2.00E-19 | Copper transport protein family |
| NR | XP_003614536.1 | 1.68E-40 | hypothetical protein MTR_5g055190 [Medicago truncatula] |
| trEMBL | tr|G7JZE9|G7JZE9_MEDTR | 6.00E-41 | Transmembrane protein, putative {ECO:0000313|EMBL:AES97494.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03157 | 10429 | 11130 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.045 |
| SRR1783600 | control | 2.047 |
| SRR1783602 | moderate drought stress | 1.178 |
| SRR1811619 | moderate drought stress | 1.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.497 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.810 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.559 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.985 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.277 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.927 |
| SRR2868004 | Drought Stress (root) | 2.457 |
| SRR2967015 | Control (root) | 2.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.364 |
| SRR9715740 | Leaf | 0.086 |
| SRR9715741 | Leaf | 0.278 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.472 |
| SRR9715743 | Root | 0.945 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.294 |
| SRR8749032 | Uninduced | 0.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.530 |
| SRR8400027 | Control - Root | 1.674 |