Gene detail information of Glyur003154s00036928 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G02210.2 | 1.00E-18 | |
| NR | KEH23715.1 | 1.35E-128 | Myb/SANT-like DNA-binding domain protein [Medicago truncatula] |
| trEMBL | tr|A0A072UCZ0|A0A072UCZ0_MEDTR | 5.00E-129 | Myb/SANT-like DNA-binding domain protein {ECO:0000313|EMBL:KEH23715.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03154 | 11444 | 12444 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003154s00036928.1 | PF12776.2 | Myb_DNA-bind_3 | 9 | 102 | 1.60E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.041 |
| SRR1783600 | control | 0.877 |
| SRR1783602 | moderate drought stress | 1.539 |
| SRR1811619 | moderate drought stress | 1.339 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.119 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.013 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.848 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.613 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.854 |
| SRR2868004 | Drought Stress (root) | 1.758 |
| SRR2967015 | Control (root) | 1.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.327 |
| SRR9715740 | Leaf | 1.507 |
| SRR9715741 | Leaf | 2.543 |
| SRR9715739 | Root | 0.213 |
| SRR9715742 | Root | 1.824 |
| SRR9715743 | Root | 0.868 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.020 |
| SRR8749029 | MeJA induced 9h | 0.031 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.008 |
| SRR8749032 | Uninduced | 0.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.794 |
| SRR8400027 | Control - Root | 8.978 |