Gene detail

Gene detail information of Glyur003142s00040822

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G27220.1	5.00E-35	NB-ARC domain-containing disease resistance protein
NR	AES70780.2	0	NB-ARC domain disease resistance protein [Medicago truncatula]
Swissprot	tr\|P60838\|DRL1_ARATH	5.00E-45	Probable disease resistance protein At1g12280
trEMBL	tr\|G7IV29\|G7IV29_MEDTR	0	NB-ARC domain disease resistance protein {ECO:0000313\|EMBL:AES70780.2}

Sequence

Transcript Sequence

>Glyur003142s00040822.1
ATGGCGGGTTTCGTGGCTGATTTGGCAAAGACATATGTGGAGAGAGTGATAAACGGGGCAATAACAGAATCACGTTATCTATGTTGCTTCACGTGCATTGCAAAGGAATTCGAAGAAGAAAAGGCTAAGTTGAAAGCTGAAAGGGAAACTATGGCGCAACGTTTTGACGTGGCAACCAGAAGAGATAAAGATATTCAAGAGCAAGTTGATAAGCTCCTTCAAGAGGACACCACAGCAAAACAGACATGTCTTTTCGGATTTTGTCCTAATTGCATGTGGCGATATAAAAGGGGAAAGGAATTGGCGAATAAGACGGAGGAGATNAAAAGACAGATAGNAAAGGGAGAGAAGCTTGAAAATGTTGAACTCCCTCGTTGTCTTCCAGGTGTTGAATATTATTCCTCCCAAGATTACATCTCTTTTAAAAGCAGAGAGTTGAAATACAAAGAGCTCTTGGATGCACTGAAGGATGACACCAACTATATAACGGGATTGCAAGGGATGGGGGGCACTGGTAAAACCACATTNGCCANAGAAGTGGGCAAGGAACTTNAGCAATCCGAACAATTCGCTCGGGTCATCGATACGACAGTGTCATTTACTCCTGATATAAAAAAGATTCAGGATGACATTGCTGGACCCTTGGGATTGGAATGGGAGAACTGTAATGAATCAGACCGACCCAAGAAACTGTGGAGNAGATTAACCAATGGTGAGAAAATTCTTCTAATACTGGATGATGTGTGGGGACATATTGATTTCAGGCAAATAGGGATTCCTCATAGTGACGATCACAAAGGTTGCAGAGTTCTTGTAACCACCCGTGATCTACAGAGGCATGCTCGTATAAGCGATAGTTCCTCGAAAAGTTTGCTTGAAAAGGGACGTAAAATCGCAGATGAATGCAAAGGATTACCGATTGCAATTGCAGCTATTGCTAGCAGTTTAAAGGGCCGACAACGTCGAGAAGAGTGGGATGTGGCCTTAAAATNCTTGCAGAAGCCTCTTGTGTCTATGCACAGTGTTGGTGATGGCAATTTGGATCAAATCTACAAATGTTTGAAGTTTAGCTATGATTATTTGAAGGATGAAAAAGCCAAGGGACTGTTCCTCTTATGCTCTGTATTCCGAGAGGATGAAGAAATTTCTACTGAAACTTTAACTAGACTTGGTATTGGATCGGGCCTTTTTGGGGAAGATTATGACAAATACGATGACGCTCGGCTGGAAGTAACTGTAGCAAAAAATAAGCTCCTAGATTCTTGTTTATTGTTGAAGGGCAATGGAGGATGTGTGAAAATGCATGACTTGGTTCGTGATGTGGCCCACCGGATAGCGAACAAGGAAATTCAAGCAATAAATTTGTCTAAAATAAACCAAAAGTCATTGGTTGAAAGGGAGAACAATATTAAATATTTGTTATGCGAAGGCAAATACAAGGATGTGACTTCTTGTAGGATTGATGGTTCCAAGCTTGAGATTTTAATTGTCTTCTTCACCAGGGATGAAGACTGCCATGATGTGGAACTTCCAGATTCATTCTTTGAAAAGAAAGCAGGGCTTCGAGTTTTGCATTTATCAAATGATTATTGGTTCGATCCACTGGCTCTATCATTACCACAATCATTTCAGTCATTGGCAAATATTCGATCTCTAATAGTTTGTGGTATCATATTAGGCGACATCTCTATTTTGGGAAACCTGCAAAGTCTTGAGACTCTTGATTTGTGGCGTTGTACAATTGATGAATTGCCACGTGAAATTACAACGCTGGAGAATTTTAGATTGTTGAAATTGAAATGGTGTGAAATTAGAAGGGATAATCCATTTGAAGTTATTAAAAGATGCTCATCCCTTGAAGAGTTGTATTTCCAAGGTAGTTTTGAAAGACTTTGTGGAGAAATAACCTTTCCTATGTTGCAAAGGTATCATGTCATTAAAACGTGGGAGCATAAAGTGGATGATTCACGATTAAAATGTGTGTCTTTTGAAGGGAATGAGAAAGAAGATAGCTTTTATTTCTCAGAAGCAACATTCAAGTATTGGATGCGAACAGCAGAGTTTCTTCGATTAAGAAGAATTCATAGGGGATGGCCATGGAGAAATCTTATACCTGATATTGTTCCTATAGAACAAGGTATGAATGAACTAATTGAGCTTCATTTGGATTCTATTTCACAACTACAGTGCCTCATTGACACTAAGCATATCATTGATTCTCGATCACAAAGTGTCTTCTGCAACTTGGTTGTACTAGAGCTTGATGGAATAGAAAATTTAGAAGAACTATGCAATGGGCCCCTTTCCTTTGACTCTCTGAAGAGTTTAAAGCAGCTAGTGATTAGGAACTGTATACATTTACGAAGCTTGTTTGAGTGCAAGCTAAACCTCTGCAATCTAAGGAGATTGAAACTACAGGAATGCCCGATGTTGGTCTCCCTATTTCAACTGTCGACTTCTCGAAGCCTAGTGATGTTGGAGGAATTAGACATAACTGATTGTAAGCAACTGAAACACATAATAGTAGATGAAAGAAGAGAGGAGGAACCAGGAGAAGAAAAAGTTGACGGTGATAATGATCACAAGAGTCATGGCTCAATGTTTCATAAACTGAAATTTCTTAAAATTCAAGGATGTCCCCAATTAGAATTCATATTTGGCCAACACCAAGATGTTGAACTTGGTTCACTAAAAGAATTGATTCTCGGTGAATTGCCAAATTTTATCGACATTTTTTCAGAATGTTATCATCCCATGGCTTCACTTAGATGGTTCAATGGCAAAAATACAATTGACCCTATCAAACACAACATCTTCTCTTGGACTCATATATGCTGTTATGGTCATAAACATAGACACAAATTGAGGAGTACTACAACTGCTAAAATCCCATTGGTTTCCAAGGATCAACTACAAGACTGCTCCACGAGGACCACGACATTGGATTTGAGTGAGAATGTGGAGCATTTTCTTGCTTTGAAAAATCTCAAGATATGCAACTGCAGTGCAGAAAATATCTTTTGTGCCAGTGAAATAAATGGACAACAAATACACTTAGGGTTGCAAAAGATTGAGCTCTATGATATGCCTCAGATGACATATCTTTTTGTGGGTCCNAAGAATTCTTTTGCCCTCCAAAACCTTTTGACAATAAAAATAGTGCGATGTGAAAATTTGAAAATGATATTTTCCTCTTCTATTTCAAGATGTCTACCACAATTGCTCAATCTAATAATAGCAGAATGCAAAGAATTGAAGCAGATAATTGAAGAGGANGTGGAGAATCCAAAAATGTCAAATTCTCTTTTTCCAACGACATGCTTCCCAACACTANAAGCACTTGTTGTTGCAAACTGCAACAAGTTGAAATGTGTATTTCCAGCCTCCATATGTAAAGAGCTTCCCAAGCTAAAGTTTATGTGTGTAATAGGAGCAGATGCACTAGAGGAAATATTCAGATGTGAAGGTGATCAGAAAGTTGAGATTCCAAATCTAAAAGCAGTAGTATTTGTCAGACTATCAAATCTCAACCAAGCCCAGGGGACTCATTTTCAGGCAGTAGAAAACCGTTTCATACGTAATTGTCCAAAACTCTCTTTGACTGACATGGAAATTGACGGCGACATCGACATTACATATGGTGATATGGACATAGATGATAATATGCAAAGGCAATTGGGGAGTCTATTTATCCAATCACTAGAAGACTCCAAAATCCAAGATACAAGTAATGAAAATCCAAGTGCAAAAACCATTGAAGATTTTCCAACTGGGCATGAAGTTCAGGTAGCATCAGGATATGAGTTGACTTCTTCACAGTGTCTAAAAGAAATGGAAGACCCAAGTATTCAAGAGGATTCTTTGCCAGAAAAAACTGTAACAACAATTTTGTCCACCAACTCAGAGAGAAGGAATGAGCCACCTATGCCATTAGGCATTAATTCAAGTGTGGAAGAAGGAACTACTTCCATTTACGCCAAGACAAAAACATTGTCAACTCATTCTAAATCAGTCAATCCATCATCTCGTCCAATAGTTAATGTTGAGCCTAAAACATTTTTACCGGAAGATGGTGATGGCCAAATGGCCATACCTTCATTTTCAATTGCCATTGCAGAGCCACTCACCAAAGAGGTTGATGTCGAAGACTCTCAGAAAAATGACTCGGATGATGATTCTTCGATGAAAGTGAGCCCAATTATTGACGAACAGTTTTCTAAGAATGATGAAATTAGAGCTTCAGAATCTAAGCCCTCTCCTAGCATCCCTTCTCCTATTGCATCTCATCGGTCTCCTTCCATGCCTTGTAAAGGGAACCCTCCTCAAATAGTGGGAGATCCATGTTTTTCTTCTCTTGTCACAACGGAGCTTGAGCAATTGGTCTCCAAGAAGTATTTGGCTTCTGAGAAAGTGTCTTTGTTGATTAATTTCCTTGTGAAGTATCCATCAGTTCGTTTACCAGACAATTCACTCAGTAATAGATACAAGGGATATGCCTACAGCTGTCTAGCTGAGCTATTGAAATTCCTTCAAACCCATAGTGTGTTGGACGTGTTAGGGTCAAGTCACTCTGAATTTGTGGAGTTATTACAAGACATGCGTAGCTTTGCTTTTGATAAGGATTGGTTGGACAGTGTTGAAAGGCGCGCCTTGTTTCCTGGTTTACAAGTCTCTCAAGAGGACTTGCAAAAACTATTGGACTCCAAGCAATGGGCCACCAAGGAAGTTGAAGAATTGCATTTGAAGATAGGCACCTTGACTCAACAAATGGAGGATCTTAAGCATCAACTGACGTCCTCTGAAACCATTTTGAAGGATATCATTCAACAAGAGTCACAAGTTTTAGAAGCTATAACTGCTTTAAGCATTCCTCTAAGCTATTAGACTATTATTTCTTCTTTTATTCCTTCGTTGCTACATTTTTTATTGTTGGAGTGTTTTATACTTGAACATTATTTTTTCCCTTGGGTAGTTTTCTTCGTTAATTACTCATTTGAAATAAAACTATACCATCTTAT

Protein Sequence

>Glyur003142s00040822.1
MAGFVADLAKTYVERVINGAITESRYLCCFTCIAKEFEEEKAKLKAERETMAQRFDVATRRDKDIQEQVDKLLQEDTTAKQTCLFGFCPNCMWRYKRGKELANKTEEXKRQIXKGEKLENVELPRCLPGVEYYSSQDYISFKSRELKYKELLDALKDDTNYITGLQGMGGTGKTTXAXEVGKELXQSEQFARVIDTTVSFTPDIKKIQDDIAGPLGLEWENCNESDRPKKLWXRLTNGEKILLILDDVWGHIDFRQIGIPHSDDHKGCRVLVTTRDLQRHARISDSSSKSLLEKGRKIADECKGLPIAIAAIASSLKGRQRREEWDVALKXLQKPLVSMHSVGDGNLDQIYKCLKFSYDYLKDEKAKGLFLLCSVFREDEEISTETLTRLGIGSGLFGEDYDKYDDARLEVTVAKNKLLDSCLLLKGNGGCVKMHDLVRDVAHRIANKEIQAINLSKINQKSLVERENNIKYLLCEGKYKDVTSCRIDGSKLEILIVFFTRDEDCHDVELPDSFFEKKAGLRVLHLSNDYWFDPLALSLPQSFQSLANIRSLIVCGIILGDISILGNLQSLETLDLWRCTIDELPREITTLENFRLLKLKWCEIRRDNPFEVIKRCSSLEELYFQGSFERLCGEITFPMLQRYHVIKTWEHKVDDSRLKCVSFEGNEKEDSFYFSEATFKYWMRTAEFLRLRRIHRGWPWRNLIPDIVPIEQGMNELIELHLDSISQLQCLIDTKHIIDSRSQSVFCNLVVLELDGIENLEELCNGPLSFDSLKSLKQLVIRNCIHLRSLFECKLNLCNLRRLKLQECPMLVSLFQLSTSRSLVMLEELDITDCKQLKHIIVDERREEEPGEEKVDGDNDHKSHGSMFHKLKFLKIQGCPQLEFIFGQHQDVELGSLKELILGELPNFIDIFSECYHPMASLRWFNGKNTIDPIKHNIFSWTHICCYGHKHRHKLRSTTTAKIPLVSKDQLQDCSTRTTTLDLSENVEHFLALKNLKICNCSAENIFCASEINGQQIHLGLQKIELYDMPQMTYLFVGPKNSFALQNLLTIKIVRCENLKMIFSSSISRCLPQLLNLIIAECKELKQIIEEXVENPKMSNSLFPTTCFPTLXALVVANCNKLKCVFPASICKELPKLKFMCVIGADALEEIFRCEGDQKVEIPNLKAVVFVRLSNLNQAQGTHFQAVENRFIRNCPKLSLTDMEIDGDIDITYGDMDIDDNMQRQLGSLFIQSLEDSKIQDTSNENPSAKTIEDFPTGHEVQVASGYELTSSQCLKEMEDPSIQEDSLPEKTVTTILSTNSERRNEPPMPLGINSSVEEGTTSIYAKTKTLSTHSKSVNPSSRPIVNVEPKTFLPEDGDGQMAIPSFSIAIAEPLTKEVDVEDSQKNDSDDDSSMKVSPIIDEQFSKNDEIRASESKPSPSIPSPIASHRSPSMPCKGNPPQIVGDPCFSSLVTTELEQLVSKKYLASEKVSLLINFLVKYPSVRLPDNSLSNRYKGYAYSCLAELLKFLQTHSVLDVLGSSHSEFVELLQDMRSFAFDKDWLDSVERRALFPGLQVSQEDLQKLLDSKQWATKEVEELHLKIGTLTQQMEDLKHQLTSSETILKDIIQQESQVLEAITALSIPLSY

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold03142	545	12913	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0043531 ADP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003142s00040822.1	PF00931.17	NB-ARC	151	277	2.50E-22
Glyur003142s00040822.1	PF00931.17	NB-ARC	286	395	3.10E-18

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	27.441
SRR1783600	control	27.775
SRR1783602	moderate drought stress	40.663
SRR1811619	moderate drought stress	41.035

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	13.629
DRR006520	Root Summer glycyrrhizin high producing strain	13.223
DRR006521	Root Winter glycyrrhizin high producing strain	0.657
DRR006522	Root Winter glycyrrhizin high producing strain	0.547
DRR006523	Root Summer glycyrrhizin low producing strain	5.465
DRR006524	Root Summer glycyrrhizin low producing strain	5.514
DRR006525	Leaf Summer glycyrrhizin high producing strain	16.947
DRR006526	Leaf Summer glycyrrhizin high producing strain	16.657

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.163
SRR2868004	Drought Stress (root)	15.558
SRR2967015	Control (root)	12.444

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	12.164
SRR9715740	Leaf	4.814
SRR9715741	Leaf	8.458
SRR9715739	Root	2.951
SRR9715742	Root	16.674
SRR9715743	Root	15.480

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.127
SRR8749028	MeJA induced 9h	2.994
SRR8749029	MeJA induced 9h	7.182
SRR8749030	Uninduced	0.542
SRR8749031	Uninduced	2.808
SRR8749032	Uninduced	1.495

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	38.987
SRR8400027	Control - Root	42.584