Gene detail information of Glyur003141s00041971 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004514910.1 | 1.18E-07 | PREDICTED: putative ribonuclease H protein At1g65750-like [Cicer arietinum] |
| trEMBL | tr|A0A061GL40|A0A061GL40_THECC | 3.00E-07 | Uncharacterized protein {ECO:0000313|EMBL:EOY30590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03141 | 13932 | 16911 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.631 |
| SRR1783600 | control | 0.636 |
| SRR1783602 | moderate drought stress | 1.377 |
| SRR1811619 | moderate drought stress | 1.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.630 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.107 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.533 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.665 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.508 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.977 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.330 |
| SRR2868004 | Drought Stress (root) | 1.075 |
| SRR2967015 | Control (root) | 1.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.809 |
| SRR9715740 | Leaf | 0.352 |
| SRR9715741 | Leaf | 0.395 |
| SRR9715739 | Root | 0.859 |
| SRR9715742 | Root | 1.704 |
| SRR9715743 | Root | 1.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.143 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.082 |
| SRR8400027 | Control - Root | 2.776 |