Gene detail information of Glyur003137s00039593 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14200.1 | 8.00E-12 | Pentatricopeptide repeat (PPR) superfamily protein |
| NR | XP_004502260.1 | 4.96E-163 | PREDICTED: uncharacterized protein LOC101496977 [Cicer arietinum] |
| trEMBL | tr|V7C9J4|V7C9J4_PHAVU | 2.00E-90 | Uncharacterized protein {ECO:0000313|EMBL:ESW25586.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03137 | 10212 | 15651 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.063 |
| SRR1783600 | control | 3.877 |
| SRR1783602 | moderate drought stress | 2.626 |
| SRR1811619 | moderate drought stress | 2.776 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.944 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.831 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.315 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.350 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.617 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.457 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.069 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.901 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.204 |
| SRR2868004 | Drought Stress (root) | 11.111 |
| SRR2967015 | Control (root) | 8.529 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.487 |
| SRR9715740 | Leaf | 11.321 |
| SRR9715741 | Leaf | 22.307 |
| SRR9715739 | Root | 1.518 |
| SRR9715742 | Root | 6.879 |
| SRR9715743 | Root | 8.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.530 |
| SRR8749028 | MeJA induced 9h | 11.790 |
| SRR8749029 | MeJA induced 9h | 6.711 |
| SRR8749030 | Uninduced | 27.582 |
| SRR8749031 | Uninduced | 6.631 |
| SRR8749032 | Uninduced | 4.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.125 |
| SRR8400027 | Control - Root | 11.894 |