Gene detail information of Glyur003130s00042623 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G33520.1 | 9.00E-64 | D111/G-patch domain-containing protein |
| NR | XP_004498120.1 | 5.08E-107 | PREDICTED: protein MOS2-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9C801|MOS2_ARATH | 1.00E-75 | Protein MOS2 |
| trEMBL | tr|V7C6R9|V7C6R9_PHAVU | 8.00E-94 | Uncharacterized protein {ECO:0000313|EMBL:ESW25063.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03130 | 16553 | 17287 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.245 |
| SRR1783600 | control | 0.550 |
| SRR1783602 | moderate drought stress | 0.408 |
| SRR1811619 | moderate drought stress | 0.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.615 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.585 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.524 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.841 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.769 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.196 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.506 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.559 |
| SRR2868004 | Drought Stress (root) | 0.973 |
| SRR2967015 | Control (root) | 1.611 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.332 |
| SRR9715740 | Leaf | 1.302 |
| SRR9715741 | Leaf | 1.433 |
| SRR9715739 | Root | 3.087 |
| SRR9715742 | Root | 2.010 |
| SRR9715743 | Root | 3.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.164 |
| SRR8749028 | MeJA induced 9h | 0.492 |
| SRR8749029 | MeJA induced 9h | 0.637 |
| SRR8749030 | Uninduced | 1.072 |
| SRR8749031 | Uninduced | 0.778 |
| SRR8749032 | Uninduced | 0.453 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.485 |
| SRR8400027 | Control - Root | 2.438 |