Gene detail information of Glyur003120s00035874.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G39890.1 | 1.00E-15 | Protein of unknown function (DUF1637) |
| NR | XP_003543744.1 | 4.66E-31 | PREDICTED: 2-aminoethanethiol dioxygenase-like [Glycine max] |
| trEMBL | tr|I1LWJ1|I1LWJ1_SOYBN | 2.00E-31 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G05230.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03120 | 27394 | 29032 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K10712 | ADO | EC:1.13.11.19 | Taurine and hypotaurine metabolism | map00430 |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.833 |
| SRR1783600 | control | 3.939 |
| SRR1783602 | moderate drought stress | 3.133 |
| SRR1811619 | moderate drought stress | 3.325 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.493 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.895 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 45.764 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 45.576 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.008 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.186 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.025 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.231 |
| SRR2868004 | Drought Stress (root) | 9.443 |
| SRR2967015 | Control (root) | 6.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.954 |
| SRR9715740 | Leaf | 8.411 |
| SRR9715741 | Leaf | 20.474 |
| SRR9715739 | Root | 1.398 |
| SRR9715742 | Root | 3.190 |
| SRR9715743 | Root | 2.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.063 |
| SRR8749028 | MeJA induced 9h | 5.629 |
| SRR8749029 | MeJA induced 9h | 4.483 |
| SRR8749030 | Uninduced | 7.743 |
| SRR8749031 | Uninduced | 24.951 |
| SRR8749032 | Uninduced | 15.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.067 |
| SRR8400027 | Control - Root | 9.468 |