Gene detail information of Glyur003120s00035870 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G08960.1 | 6.00E-54 | ARM repeat superfamily protein |
| NR | XP_004492469.1 | 5.86E-78 | PREDICTED: importin-11-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|K7MTL7|K7MTL7_SOYBN | 6.00E-76 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G43420.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03120 | 913 | 3118 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003120s00035870.1 | PF03810.14 | IBN_N | 29 | 112 | 5.90E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.415 |
| SRR1783600 | control | 9.079 |
| SRR1783602 | moderate drought stress | 7.526 |
| SRR1811619 | moderate drought stress | 7.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.088 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.074 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.121 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.011 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.594 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.719 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.741 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.863 |
| SRR2868004 | Drought Stress (root) | 5.864 |
| SRR2967015 | Control (root) | 6.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.656 |
| SRR9715740 | Leaf | 1.388 |
| SRR9715741 | Leaf | 2.243 |
| SRR9715739 | Root | 1.576 |
| SRR9715742 | Root | 6.942 |
| SRR9715743 | Root | 4.493 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.615 |
| SRR8749028 | MeJA induced 9h | 3.357 |
| SRR8749029 | MeJA induced 9h | 1.311 |
| SRR8749030 | Uninduced | 0.116 |
| SRR8749031 | Uninduced | 0.434 |
| SRR8749032 | Uninduced | 0.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.976 |
| SRR8400027 | Control - Root | 9.010 |