Gene detail

Gene detail information of Glyur003084s00034091

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G60160.1	0	Potassium transporter family protein
NR	XP_004509839.1	0	PREDICTED: putative potassium transporter 12-like [Cicer arietinum]
COG	YP_003673841.1	7.00E-60	potassium transporter [Methylotenera versatilis 301]
Swissprot	tr\|O80739\|POT12_ARATH	0	Putative potassium transporter 12
trEMBL	tr\|I1KXH7\|I1KXH7_SOYBN	0	Potassium transporter {ECO:0000256\|RuleBase:RU321113}

Sequence

Transcript Sequence

>Glyur003084s00034091.1
CTTCACACTCAAATGGTGACATGTTTTGCTGTAGAGAAAAAGGGATGAACTTTTTTCTCAAAAACCACCAAAACTTGCTTATAAAGTTCCACACTTTCAAACGATAATCCAATTGGGCAATTGGGTTTCTGATTTTATCTGTTATTGTTGTTGGTGGTGGCTTTGTGTGGAAGGAAGAATGAAAGGGGATAGGATAGAAGAGAGCAGTGTGAGGTTGTTGAGCANAAGTAGCAGCAGTGGTGGTGGGAGCAGTGAGTCTAGGTGGGTTGATGGCAGTGAAGTTGACTGGGATGAGGTTCCTCCACCATGGTCTAATAAGCACCATGGAAATGATGGTGGTANTAGAGAAGGGTATGGATCACTCAGGAGGAGGCTTGTCAAGAAACCCAAGAGNGTTGACTCTTTTGATGTTGAAGCCATGGAGATTGCTGGTGGAAGTCATGGTGCAGAAGCAATGTTTGCAGATCTGGGTCATTTTTCTGTACCAGCAATACAGATTGCATTCACTTGTGTGGTATTTCCCTGTCTCCTCCTTGCTTATATGGGACAAGCTGCTTTTTTGATGGAAAACCCCACTTCTTATTCAAGCGTATTCTACAAATCTGTTCCAGAGAGTCTCTTCTGGCCAGTGTTTGTTATAGCCACACTTGCTGCTATGATTGCAAGCCAAGCAATGATATCTGCTACATTTTCATGCGTAAAACAATCCATGGCTTTGGGATGCTTCCCCAGGCTGAAGATAATCCACACCTCAAGAAAGTTTATTGGCCAAATATACATCCCTGTGATTAACTGGTTTCTGATGATCATGTGCATAGTTGTCGTTTCCATCTTCCAAAGCACTACTGATATTGCAAATGCATATGGCATTGCTGAAGTTGGTGTCATGATGGTCAGCACCACCTTGGTGACCCTTGTAATGCTTCTAATTTGGCAGACTAACTTGTTTCTGGCATTTCTTTTCCCACTTGTATTTGGTTCAGTGGAGCTCATTTACATGTCTTCTGTCCTATCAAAAATCTTTGAGGGTGGCTGGCTTCCACTTGCCTTTGCCACCTTTTTCCTCTCCGTGATGTACACGTGGAACTACGGGAGCGTATTGAAGTACCGAAGCGAAGTCAGGGAAAAGGTTTCGATGGAGTCGATGCTTGATCTTGGCTCTGATCTTGGAACAGTAAGAGTGCCAGGAATAGGATTGCTTTATAATGAGCTTGTCCAGGGCATCCCTTCCATTTTTCTGCAGTTCCTGCTGAGCCTCCCAGCTCTTCACTCTACTATAGTTTTCGTCTGCATCAAATATGTCCCGGTTCCCGTGGTTCCTCAAGAGGAAAGGTTTCTGTTTCGAAGAGTTTGCCCGAAAGACTACCACATGTTCCGCTGTGTCGCCAGGTATGGTTACAAGGATGTGAGGAAGGAAGATCACCATGCATTTGAGCAACTTCTTATTGAAAGTCTTGAGAAGTTCTTGAGAAGGGAAGCTCTAGAAGCTGCCTTGGAGTTGGAGGGAAACTTAACCGACGATACAGACAGTGTCTCAGTGAATACAAGAAATTCTGATACTCTGGCCGGAACTGGGGCAGCAGAGGAGCTTAGGATTCCACTGATGCATGGTCAGAATTTGGAAGAAACAGGAACTTCTACCTCTCAAGAAGCTGCGACTGCATCAGCATTACCATCAAGCTACATGGCGTCAGATGAAGATCCTAGTCTTGAATATGAGCTTTCGGCGATTAGAGAAGCAATGGATTCGGGATTCACCTATTTGCTTGGACATGGGGATGTGAGGGCAAAGAAGAAGTCTTTTTTCTTCAAGAAATTGGTGATAAATTATTTCTATGCATTTCTCAGAAAGAACTGCAGAGGAGGTACTGCAAACATGAGAGTGCCTCACACCAATATCATTCAAGTGGGGATGACATATATGGTCTGACTGAGCCATGCATTCTTTCTGATAATTATGC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold03084	24266	28987	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0071805 potassium ion transmembrane transport

cellular_component
GO:0016020 membrane

molecular_function
GO:0015079 potassium ion transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003084s00034091.1	PF02705.11	K_trans	89	409	6.30E-106

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.966
SRR1783600	control	7.976
SRR1783602	moderate drought stress	6.001
SRR1811619	moderate drought stress	6.147

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.445
DRR006520	Root Summer glycyrrhizin high producing strain	6.011
DRR006521	Root Winter glycyrrhizin high producing strain	5.137
DRR006522	Root Winter glycyrrhizin high producing strain	4.840
DRR006523	Root Summer glycyrrhizin low producing strain	6.642
DRR006524	Root Summer glycyrrhizin low producing strain	6.826
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.434
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.458

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	9.198
SRR2868004	Drought Stress (root)	8.890
SRR2967015	Control (root)	10.209

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	4.204
SRR9715740	Leaf	6.056
SRR9715741	Leaf	6.379
SRR9715739	Root	2.842
SRR9715742	Root	4.195
SRR9715743	Root	4.187

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.567
SRR8749028	MeJA induced 9h	4.951
SRR8749029	MeJA induced 9h	2.007
SRR8749030	Uninduced	1.329
SRR8749031	Uninduced	0.489
SRR8749032	Uninduced	0.880

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	7.574
SRR8400027	Control - Root	7.341