Gene detail information of Glyur003079s00045022 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G25805.1 | 4.00E-112 | |
| NR | XP_003614512.1 | 0 | hypothetical protein MTR_5g054910 [Medicago truncatula] |
| trEMBL | tr|G7JZC5|G7JZC5_MEDTR | 0 | Transmembrane protein, putative {ECO:0000313|EMBL:AES97470.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03079 | 9553 | 16062 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.101 |
| SRR1783600 | control | 10.067 |
| SRR1783602 | moderate drought stress | 9.353 |
| SRR1811619 | moderate drought stress | 9.388 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.071 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.067 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.961 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.729 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.349 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.145 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 29.741 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.991 |
| SRR2868004 | Drought Stress (root) | 9.341 |
| SRR2967015 | Control (root) | 6.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.670 |
| SRR9715740 | Leaf | 29.735 |
| SRR9715741 | Leaf | 34.559 |
| SRR9715739 | Root | 4.052 |
| SRR9715742 | Root | 4.805 |
| SRR9715743 | Root | 4.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.640 |
| SRR8749028 | MeJA induced 9h | 5.659 |
| SRR8749029 | MeJA induced 9h | 7.105 |
| SRR8749030 | Uninduced | 3.056 |
| SRR8749031 | Uninduced | 1.868 |
| SRR8749032 | Uninduced | 2.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.643 |
| SRR8400027 | Control - Root | 7.725 |