Gene detail information of Glyur003077s00042519 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G29290.1 | 1.00E-08 | |
| NR | KHN47398.1 | 2.39E-41 | hypothetical protein glysoja_020266 [Glycine soja] |
| trEMBL | tr|I1M1Q7|I1M1Q7_SOYBN | 9.00E-42 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G29870.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03077 | 5813 | 6112 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.988 |
| SRR1783600 | control | 3.366 |
| SRR1783602 | moderate drought stress | 1.144 |
| SRR1811619 | moderate drought stress | 0.623 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.382 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.717 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.694 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.085 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.702 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.762 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.256 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.944 |
| SRR2868004 | Drought Stress (root) | 18.316 |
| SRR2967015 | Control (root) | 17.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.476 |
| SRR9715740 | Leaf | 5.075 |
| SRR9715741 | Leaf | 22.013 |
| SRR9715739 | Root | 2.931 |
| SRR9715742 | Root | 5.245 |
| SRR9715743 | Root | 3.733 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 164.207 |
| SRR8749028 | MeJA induced 9h | 255.183 |
| SRR8749029 | MeJA induced 9h | 166.823 |
| SRR8749030 | Uninduced | 38.629 |
| SRR8749031 | Uninduced | 92.363 |
| SRR8749032 | Uninduced | 55.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.326 |
| SRR8400027 | Control - Root | 15.800 |