Gene detail information of Glyur003068s00036759 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G47740.1 | 2.00E-08 | ABC2 homolog 2 |
| NR | XP_007138204.1 | 4.38E-11 | hypothetical protein PHAVU_009G189300g [Phaseolus vulgaris] |
| Swissprot | tr|Q1PEH6|AB3A_ARATH | 5.00E-09 | ABC transporter A family member 3 |
| trEMBL | tr|V7B008|V7B008_PHAVU | 2.00E-11 | Uncharacterized protein {ECO:0000313|EMBL:ESW10198.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03068 | 18876 | 19259 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.413 |
| SRR1783600 | control | 0.604 |
| SRR1783602 | moderate drought stress | 3.453 |
| SRR1811619 | moderate drought stress | 3.537 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.848 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.560 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.581 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.684 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.242 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.241 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.388 |
| SRR2868004 | Drought Stress (root) | 0.421 |
| SRR2967015 | Control (root) | 0.560 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.173 |
| SRR9715740 | Leaf | 2.692 |
| SRR9715741 | Leaf | 0.975 |
| SRR9715739 | Root | 1.376 |
| SRR9715742 | Root | 0.948 |
| SRR9715743 | Root | 0.956 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.215 |
| SRR8749028 | MeJA induced 9h | 1.318 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.615 |
| SRR8749031 | Uninduced | 1.121 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.334 |
| SRR8400027 | Control - Root | 3.762 |