Gene detail

Gene detail information of Glyur003062s00042771

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G27220.1	3.00E-53	NB-ARC domain-containing disease resistance protein
NR	KEH38455.1	0	disease resistance protein (CC-NBS-LRR class) family protein [Medicago truncatula]
COG	YP_002463148.1	6.00E-13	NB-ARC domain-containing protein [Chloroflexus aggregans DSM 9485]
Swissprot	tr\|Q9T048\|DRL27_ARATH	1.00E-64	Disease resistance protein At4g27190
trEMBL	tr\|A0A072VJZ9\|A0A072VJZ9_MEDTR	0	Disease resistance protein (CC-NBS-LRR class) family protein {ECO:0000313\|EMBL:KEH38455.1}

Sequence

Transcript Sequence

>Glyur003062s00042771.1
ATGGCAATGGATATTGCTTCTAAAATTGCTGACTATTTGGTTCCACCTGTTANACGTCAATTTGGTTACATACTCCACTACAAGGGCAACCTTGAAAGGCTGAAAACCGAGGTCCAAATGTTGGAGGGAACCAAAGATAGCGTGCAACACTCTGTTGATGAGGCTAAAAGAAATGGAAAAGAGATTGAAAATGTTGTCCAGAACTGGCTGAACCAAGTGGACAGCACTGTTGCTGAGGCAAAGACAATTATTGACAATGAAAGCCATGCAAACGCTGAATGTGGCATGGGGCACATTTGCAATCCTTGGACAAGGCACCAGCTGAGCAGGAAGGCAAAAAAGATGACACAAGAGATTTCTCAAGTCCTGGCACGTGGAAAATTTGACAGAATTTCTTACCATGCTGCTTCTCAAGAGTCAACCATGCCGCCTGGTAGAGATTATGAGGCCCTGGGGTCCAGAACATCGATGCTGAAGGAGATTATGTTGGCATTGAAGGATCCTGACATCTTTATTGTTGGGGTGTATGGGATGGGTGGTGTGGGTAAGACAACATTGATGAACGAGTTAAATAGGCAAGCAAAGAAAGATGGGTCATTTGATGCTGTAGCTAAGGCTGAAATAGGTAATTCTCCAAATGTGGAAAATATTCAAGGCCAAATTGCTGATGAATTGGATCTACAATTTAATAAGGAGACAAAAGAGGGAAGAGCAAGACAATTACATGAAAGGATAAGCAAGGAGAAGAGTATTCTTGTTATTCTGGATGACATTTGGGGAAAACTTGATTTGACAGAAGTGGGGATTCCTTCTGGTGATGCCCACAGAGGATGCAAGTTGGTGGTGACATCCAGAGATGTTAATGTGCTGAGCTCTGAGATGGGGATTCAAAAAGAATTTAGACTTGAAGTTTTACTTGAGGAGGATAGTTGGAAATTGTTTGAGAAAATGGCAGGAGATGTTGTTCATGAAATCAATATAAAGCCAATTGCAGTAGAAGTGGCCAGATGCTGTGCTGGTTTGCCCCTTTTGATTGTTACTGTGGCAAAGGCTTTGAGGAAAAAGAATTTCTCTTATTGGAGCACTAAGTTGAATGAGTTGAAGAGATTTGATCAAGAAGGGCCGCTTAAGAAAGTCCAGCTTACTTTGGAGTTGAGTTATAATTGTTTAGAGAGCGTCGAACTAAAGCAACTATTCTTATTCATTGGTTCATTTGAACTAGACCACATCCACACTGGAGAGCTGTTTTCATATTGTTGGGGGTTGGGACTTTATAGCAATGTGCAAACTTTGACAGAGGCTCGAAATAAACATTACAACTTAATAAATGACCTCAGGGCCTCTTCGTTGTTGCTTGAACGGGACTTGGATTGTGTTAGAATGCATGATCTTGTACGCAATGTAGCTAAGTCACTTGCATCTAGGCTTTATCAAACCTATGCCGTGCCAAGGTACACTGAAATAAAACAATGGCCAGAGATAGATCAGCTTCAAAAGTGTCATCATATTAGCTTGGCGTGGTCTTATATTCATGAGCTTCCGGAGAAGTTGGAGTGCCCAGAGTTGAAACTACTTGTACTTGAAAATATAGACATTCAATCGTTGTGTCTCTCTGGATGTATGTTGGGAGACATAGCAATAGTTGCAGAACTCAAGAGTTTAGAAATTCTCATCCTTGAGCGATCTGATATTAAAGAGCTCCCAAAAGAAATCGGACAACTAGTTCGTCTTCGAATGTTGAATTTAGCCAACTGCTCTGAATTAAGAGTCATTCCTGCAAATCTTTTTTCAAGCTTAACGTGCTTGGAAGAGTTGTACATGGGGAATTGCTTTATCCAATGGGATGTCAAGGGAAGAAATGATCATAGCAATAATGCAAGTCTGGATGAGCTAAGGAATTTGTCCCAGCTAACAACTTTGGACATAATGATTCAAGATGCTTCAGTTTTCCCAAGGGACTTGCAGGTCTTTGCAAAGCTTGAAAGATACAACATTTTTGTTGGTGACAAGTGGAAATGGTCTATAGAATGGTCTGGCGGNGCTTCTGAATCTTCAAGAATACTTAAGCTCGAAGGGAGTAAGAGTACAAGTATTCTTTTGGATCATGGGTTTAGCTTCTTGTTGAATTCAGCTGAGGACATGTGCTTAGCCGAATTACAGTGTGTTAGAGATGTCCTTTATGAGTTGAACAGGGAAGGTTTTCCACAATTAAAGCATTTGTGCATTCAACACAGTGCTGAATTGAAATACATCATTAACTCAATGGGGTGGGTTCATCCCCATCCTGCCTTCCCCAACTTAGAGACTTTGGATCTTCAAAATCTATTTAATCTAGAACAAATATGCCATGGCCCAATTCCAAATCAATCTTTCTCCAAACTTAAATGTATTGATGTCAAATGTTGTCATAAGTTGAAGAATTTGTTGTGGTATTCCCTCATTAGAGACCTTCCTCAACTTCTTGAAATAAAAGTTTCTGATTGCGAATTGATGACAGAAATCATAGCTGAGAAAACAGCTGAGGCTGATACTGAGACAGACAAGATTATGTTNCCCAAGTTGCATTCTCTTACACTTGAATGTTTGCCAAGTCTCATTAGTTTCTGTTCCATGCCATTGACAGCTGGTACGAGTTTCAAAAAGTGTGGTGAAAATTACGATGACACACAATGCACACCTGTGGCACTAATCGATCGAAAGGTAGGGATGCCCCACCTTGAAACCTTGAAGTTGTCTAAGATCAATTCTTGGAAATTGTGGGAAGATAAACTTCCCAGTCATTCTTGCATCCAAAACTTGAGGAGTTTGACAATTGACAATTGTGGTAGCATAGCATATGCATTCTCATCCTCAGTGGCTAGAGAATTTGTAAACCTGAAGCATCTTGAGATTAGTAATTGCCAAATGTTGGGAGAGATATTTGTCTTAGATGGAAAGTTGGGTAATCTCCCTTCATCTCAGAAACCAATCTCTAATGAGAAGGTTACATTTCCAAACTTGGAGACATTGGTTATCTCCCACATGGATCGTTTGAAGTCAGTATGGAACAATCAACTAGCTCCAAATTCTTTCTGCAAATTGAAGAAGCTGGAAACTAAATTCTGCAAGAAACTATCTGATGTAATTCCATCTTGTGTGCTTAATAAATTAAAGAGTCTGGAAACAATGATCGTAACCAATTGTCCAGCACTGGAAGTTGTATTTCAAATACAGGATCTAAGAACAGGAGTTGACAGTCAGGCGGGGCTACAAATGCAATTGAGAAATCTCACTTTGGAACATTTACCAATGCTGAAACACATATGGAGTGGGAATCCTTATGGAAGCTTCAGGTTTCAAAAACTTTCTCAATTGAAAGTCACTGAATGTGAAAGCCTTAATCATGTTTTTCCACTCTCTGTGGCTGGAGATCTTCCACATCTCCAAGTGCTTTATATAGAAAAATGTGGCGTAGAGACTATTGTAGCACACGATGAAATGTCTGACACAGCTCCAATACTTGTTTTCCTAGAATTAACATCTTTGAGTTTTCGGAACTTGGAGAAACTTAGAAGCTTTTACCCAACATTACATACCATGGATTGTCCCGTTTTAAGAGATTTGGATGTGGTTATCCCCAACGTAAGGGAGCTTATTCTGAGCAGCAAGGATGTCACAATGTTATGCAATGGTCAACTTAATGATAAGCTTATCTACACAGTAAAAACTCTTCGCCTGAGATGTTTTCATGATGAGTCCGACAAATTCCCATCAGGTTTCCTCCAAAGATTTATCAATCTTGAAAATCTTAAGGTAACATGCAGTTCCTTCACAGAGATTTTCTCAAGTGGAAGCTTTGGCAGTGGACATTCTGAAACAACTATGAAGTTGAGAAGCTTAACACTTGTTCTATTAAATAGCCTCGAGTTTATATGTAGAGACAAATATGAGATGCAACCCGTTCTTCAAAATCTAGAGTCATTGAAAGTGTTTCAATGTCCTAGACTGAAGACTGTAGTTCCATCCCCGATGACATTTCACAATTTAGAGGAGTTAACTCTGGGAAGTTGTGCTGGATTGGAAAAGGTTTTAACACCATCATCAGCCACTAGTTTACATAAACTTCGAATTTTATCCATAAAAAATTGTGAAAAGATAGAAAAAATTGTTGCAAGTGATGATGATAGTGATGTTGGTGGGATAACTTTTATGAAATTGGAGCATATCCATTTGGTGAACTTACCAAGGCTACGAAGCTTTTACGAGGGAAATTATAGCTTCAAATTACCATTGCTGGTATGTTTGTTGGTGATTGATTGCCCCGTGATGGAAACTTTCTCATATGGAGTGTTGAACGCACCAAGGCTCAGAGCAGTACGTGTAAAGCCAGAAAATGAATGGCAATGGAACGGTGACCTTAATACTACCATAAGAAAAATGTTTGCCGAAACGAATTCTAGATGATTGATTTCNTCCTCAAAATCTGAGTGAAGGCTCAAGTAGGTTTCGTAACTGTGCTCAGTGGAAGCTTCTTCAAGTCAAAACCTAAACCCATGGATTTCCAGTGGTTTAGAATCATGCTAGCAAAATAATGGGTACGTGTGGTGTCCAAATCTCTTTCGATGGGTGCCTTGCAATTCTGGCTTTGGTATACTGTATACTTGGGTGTGTAATTAATACCTATGTCTGCTTATTTCGGGAGGAAGATTTTTAATTTGCAGTGATTGTCATTATGTTTTTCAAAATAAAATGTTTCTCAATAATATGTATGTGTGTTCGTTTGAAAATAATCTAAAATTTAGACATATGACAAATTAAAGTATATGAAATGGTAAGGATAAAATGCGACGTTTTAATTAATTAAATTAATGACTTGACTAAGGCTCAGTTTCATAATCATGTTAAATAAGAAGAGATAACCAAAAGATTGACATAAAGTACAAAGCATATATAAAAGGTTAATGTTCATGTGGTAAACTAACGTGAATTTAGTAGAAGATTTTAGCATGTATCACCACTTCGCATGGTCTATAGTAGACTGTTAGCTACGAATTGACTAAAAAAGGTAAGAGATTAGTATGCATGGTGTAGCCATAGGATATAGAAGTGCCCTAAGAATTAATGGACTAATTAGTGAGAGTTAAGCGACTAACATTTCCAGTTAATTGGTTAGACATTGGGGGTATATATAAAGGAACCCAAAGTATTTGCTAATGTGAATACTGTACTATACCAAATTAAGATTTTACCTTTGGAACCCAAAAGCTTGGCTAATCTTCATTTCTTCAAT

Protein Sequence

>Glyur003062s00042771.1
MAMDIASKIADYLVPPVXRQFGYILHYKGNLERLKTEVQMLEGTKDSVQHSVDEAKRNGKEIENVVQNWLNQVDSTVAEAKTIIDNESHANAECGMGHICNPWTRHQLSRKAKKMTQEISQVLARGKFDRISYHAASQESTMPPGRDYEALGSRTSMLKEIMLALKDPDIFIVGVYGMGGVGKTTLMNELNRQAKKDGSFDAVAKAEIGNSPNVENIQGQIADELDLQFNKETKEGRARQLHERISKEKSILVILDDIWGKLDLTEVGIPSGDAHRGCKLVVTSRDVNVLSSEMGIQKEFRLEVLLEEDSWKLFEKMAGDVVHEINIKPIAVEVARCCAGLPLLIVTVAKALRKKNFSYWSTKLNELKRFDQEGPLKKVQLTLELSYNCLESVELKQLFLFIGSFELDHIHTGELFSYCWGLGLYSNVQTLTEARNKHYNLINDLRASSLLLERDLDCVRMHDLVRNVAKSLASRLYQTYAVPRYTEIKQWPEIDQLQKCHHISLAWSYIHELPEKLECPELKLLVLENIDIQSLCLSGCMLGDIAIVAELKSLEILILERSDIKELPKEIGQLVRLRMLNLANCSELRVIPANLFSSLTCLEELYMGNCFIQWDVKGRNDHSNNASLDELRNLSQLTTLDIMIQDASVFPRDLQVFAKLERYNIFVGDKWKWSIEWSGGASESSRILKLEGSKSTSILLDHGFSFLLNSAEDMCLAELQCVRDVLYELNREGFPQLKHLCIQHSAELKYIINSMGWVHPHPAFPNLETLDLQNLFNLEQICHGPIPNQSFSKLKCIDVKCCHKLKNLLWYSLIRDLPQLLEIKVSDCELMTEIIAEKTAEADTETDKIMXPKLHSLTLECLPSLISFCSMPLTAGTSFKKCGENYDDTQCTPVALIDRKVGMPHLETLKLSKINSWKLWEDKLPSHSCIQNLRSLTIDNCGSIAYAFSSSVAREFVNLKHLEISNCQMLGEIFVLDGKLGNLPSSQKPISNEKVTFPNLETLVISHMDRLKSVWNNQLAPNSFCKLKKLETKFCKKLSDVIPSCVLNKLKSLETMIVTNCPALEVVFQIQDLRTGVDSQAGLQMQLRNLTLEHLPMLKHIWSGNPYGSFRFQKLSQLKVTECESLNHVFPLSVAGDLPHLQVLYIEKCGVETIVAHDEMSDTAPILVFLELTSLSFRNLEKLRSFYPTLHTMDCPVLRDLDVVIPNVRELILSSKDVTMLCNGQLNDKLIYTVKTLRLRCFHDESDKFPSGFLQRFINLENLKVTCSSFTEIFSSGSFGSGHSETTMKLRSLTLVLLNSLEFICRDKYEMQPVLQNLESLKVFQCPRLKTVVPSPMTFHNLEELTLGSCAGLEKVLTPSSATSLHKLRILSIKNCEKIEKIVASDDDSDVGGITFMKLEHIHLVNLPRLRSFYEGNYSFKLPLLVCLLVIDCPVMETFSYGVLNAPRLRAVRVKPENEWQWNGDLNTTIRKMFAETNSR

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold03062	19640	26840	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0043531 ADP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003062s00042771.1	PF00931.17	NB-ARC	158	418	9.90E-50

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.678
SRR1783600	control	5.697
SRR1783602	moderate drought stress	8.566
SRR1811619	moderate drought stress	8.422

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	18.772
DRR006520	Root Summer glycyrrhizin high producing strain	18.508
DRR006521	Root Winter glycyrrhizin high producing strain	1.907
DRR006522	Root Winter glycyrrhizin high producing strain	1.820
DRR006523	Root Summer glycyrrhizin low producing strain	3.382
DRR006524	Root Summer glycyrrhizin low producing strain	3.422
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.751
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.765

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.043
SRR2868004	Drought Stress (root)	11.514
SRR2967015	Control (root)	8.494

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.469
SRR9715740	Leaf	0.064
SRR9715741	Leaf	4.929
SRR9715739	Root	0.141
SRR9715742	Root	8.644
SRR9715743	Root	6.788

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.958
SRR8749028	MeJA induced 9h	5.481
SRR8749029	MeJA induced 9h	1.093
SRR8749030	Uninduced	1.762
SRR8749031	Uninduced	0.579
SRR8749032	Uninduced	0.714

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.285
SRR8400027	Control - Root	12.449