Gene detail information of Glyur003056s00040705 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G43640.2 | 6.00E-23 | Signal recognition particle, SRP9/SRP14 subunit |
| NR | XP_007131329.1 | 1.25E-32 | hypothetical protein PHAVU_011G004600g [Phaseolus vulgaris] |
| Swissprot | tr|O04421|SRP14_ARATH | 2.00E-28 | Signal recognition particle 14 kDa protein |
| trEMBL | tr|V7AEQ4|V7AEQ4_PHAVU | 5.00E-33 | Uncharacterized protein {ECO:0000313|EMBL:ESW03323.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03056 | 5976 | 8485 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.363 |
| SRR1783600 | control | 17.078 |
| SRR1783602 | moderate drought stress | 13.797 |
| SRR1811619 | moderate drought stress | 12.549 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.898 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.680 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 41.164 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 31.401 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.138 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.939 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.484 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.942 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.291 |
| SRR2868004 | Drought Stress (root) | 6.038 |
| SRR2967015 | Control (root) | 8.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.326 |
| SRR9715740 | Leaf | 4.361 |
| SRR9715741 | Leaf | 4.765 |
| SRR9715739 | Root | 1.121 |
| SRR9715742 | Root | 3.594 |
| SRR9715743 | Root | 2.866 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.857 |
| SRR8749028 | MeJA induced 9h | 3.677 |
| SRR8749029 | MeJA induced 9h | 6.508 |
| SRR8749030 | Uninduced | 6.086 |
| SRR8749031 | Uninduced | 2.653 |
| SRR8749032 | Uninduced | 1.709 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.624 |
| SRR8400027 | Control - Root | 7.413 |