Gene detail information of Glyur003055s00043476 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G19380.1 | 3.00E-09 | CRT (chloroquine-resistance transporter)-like transporter 1 |
| NR | XP_007146130.1 | 1.27E-32 | hypothetical protein PHAVU_006G014700g [Phaseolus vulgaris] |
| trEMBL | tr|V7BJC4|V7BJC4_PHAVU | 5.00E-33 | Uncharacterized protein {ECO:0000313|EMBL:ESW18124.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03055 | 2447 | 2888 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.116 |
| SRR1783600 | control | 6.101 |
| SRR1783602 | moderate drought stress | 9.160 |
| SRR1811619 | moderate drought stress | 8.714 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.526 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.274 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.627 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.113 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.561 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.901 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.830 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.759 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.502 |
| SRR2868004 | Drought Stress (root) | 3.603 |
| SRR2967015 | Control (root) | 6.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.550 |
| SRR9715740 | Leaf | 2.825 |
| SRR9715741 | Leaf | 1.737 |
| SRR9715739 | Root | 3.228 |
| SRR9715742 | Root | 3.543 |
| SRR9715743 | Root | 4.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.364 |
| SRR8749028 | MeJA induced 9h | 0.633 |
| SRR8749029 | MeJA induced 9h | 1.139 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.077 |
| SRR8749032 | Uninduced | 0.272 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.065 |
| SRR8400027 | Control - Root | 7.208 |