Gene detail

Gene detail information of Glyur003013s00037046

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G39150.2	3.00E-134	DNAJ heat shock N-terminal domain-containing protein
NR	XP_004511002.1	0	PREDICTED: chaperone protein dnaJ 10-like isoform X1 [Cicer arietinum]
COG	YP_001940904.1	8.00E-21	DnaJ-class molecular chaperone with C-terminal Zn finger domain [Methylacidiphilum infernorum V4]
Swissprot	tr\|Q8GYX8\|DNJ10_ARATH	3.00E-122	Chaperone protein dnaJ 10
trEMBL	tr\|C6TI60\|C6TI60_SOYBN	0	Putative uncharacterized protein {ECO:0000313\|EMBL:ACU21512.1}

Sequence

Transcript Sequence

>Glyur003013s00037046.1
TAAAAATGTGAATAAAAAAGTGTCAGCTACGTGTTCCCTTCAATACGACACCGTTTCCTCTGCCACACGGATCCACCTGAAATCTGGGATTTCCTTCTGATTGTTCTCTCTCTTTTCCCTTCCTCTCAATTTCAAGTTGGAAATTTTTCCACTATTGCTTGCTGGGTTGGTTCTAGAATCTGGAGCTGTGAATTGTGATTTGAATATCACAGGCGATGGTGAAGGACACTACCTACTACGACATATTAGGTGTCAATGTTGATGCATCTGCTGCAGATATCAAGAAGGCTTATTATATCAAGGCAAGAATAGTTCACCCTGATAAAAATCCTGGGGATCCTAAGGCTGCAGAAAATTTTCAGATACTTGGCGAGGCATACCAAGTTTTAAGTGATCCTGAGAAGCGTGAAGCATATGATAAGCATGGAAAGGAAGCATTATCACAAGATTCCATGATGGACCCCACAGCTGTATTTGGAATGCTTTTTGGAAGTGAATTGTTTGAAGAATATATTGGACAACTTGCACTGGCTTCTTTAGCAGGTATGGAAATTGAGGAAGACTTGCAGGATCCTGCAGTTCGTATGCAGAAAGTTCAAGAAAAGATGAAAGCGTGGCAGAAGGAAAGGGAACAGAAGCTGATATCAATTCTGAAAGATCGCATGCAACCATTCGTTGATGGTCGAGAAGATGAATTTACAGCATGGGCAAATTCAGAAGCATGTCGTCTTTCAAAAGCTGCTTTTGGAGAGGCCATGCTACACACAATTGGTTATATCTACACACGAAAAGCATCAAGAGAACTTGGAAAGGATATACGGTATATGAATGTTCCCTTTTTGGCAGAGTGGGTACGAGACAAAGGGCACCGTATAAAGTCACAAGTGACAGCAGCCTCAGGAGCTGTGTCCCTAATTCAAATACAAGAAGAGCTCAAGAAGCTAGACCAAGGAGAAAATAGAGAAGAAAATTTAATAAAAGCTGTTGAAGATAAGAAGGATGCCATGATTAATTCCCTGTGGCGGATCAATGTGATTGATATTGAATCAACTCTGTCACATGTCTGCCAAGCAGTTCTTAAAGATCCTACTGTCTCCAAAGATGTTCTGAGGTCTCGGGCCAAAGCATTGAAAAAGTTAGGAACCATCTTTCAAGGTGCCAAGGCTGCTTACAGCAGAGAGAACAGTCTACGCCGAGAAAGTGACAATCGCGTAGATGCTGCTTCCTCTTCATAGTCATCTTGTTCAGTTTGTTTGATATGGTTGTGTATTAAGTTAATCATGTTCTTATGACCTTTTGGCGCTCAATGGATCTTGAACCTTGTTACTTCCACTNTTGAAACAAGAAGGAAAAAAAACACCAAAAAGAAGCTAAAGAAACAGTTGTTCCAGTACTTTTAGTAGGCATGATATGTAATTTCACTTCGAATTATGATATGGACTAACCTGCCCTATATAGTGCTATATATAGTATGTAAGTTTCCAGCTTCTAGTCTGTAAAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold03013	6906	14034	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003013s00037046.1	PF00226.26	DnaJ	6	68	9.70E-25
Glyur003013s00037046.1	PF14308.1	DnaJ-X	134	328	1.00E-58

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	92.766
SRR1783600	control	93.311
SRR1783602	moderate drought stress	107.622
SRR1811619	moderate drought stress	107.185

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	119.220
DRR006520	Root Summer glycyrrhizin high producing strain	117.312
DRR006521	Root Winter glycyrrhizin high producing strain	124.308
DRR006522	Root Winter glycyrrhizin high producing strain	121.527
DRR006523	Root Summer glycyrrhizin low producing strain	121.176
DRR006524	Root Summer glycyrrhizin low producing strain	121.357
DRR006525	Leaf Summer glycyrrhizin high producing strain	26.293
DRR006526	Leaf Summer glycyrrhizin high producing strain	25.901

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	65.785
SRR2868004	Drought Stress (root)	54.492
SRR2967015	Control (root)	53.775

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	29.236
SRR9715740	Leaf	28.871
SRR9715741	Leaf	28.393
SRR9715739	Root	9.530
SRR9715742	Root	54.728
SRR9715743	Root	46.368

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	40.732
SRR8749028	MeJA induced 9h	32.789
SRR8749029	MeJA induced 9h	37.789
SRR8749030	Uninduced	28.288
SRR8749031	Uninduced	21.910
SRR8749032	Uninduced	24.058

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	65.128
SRR8400027	Control - Root	63.968