Gene detail

Gene detail information of Glyur003012s00040775.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G31500.1	1.00E-118	cytochrome P450, family 83, subfamily B, polypeptide 1
NR	XP_003516815.1	0	PREDICTED: cytochrome P450 83B1-like [Glycine max]
COG	YP_004303682.1	1.00E-34	cytochrome P450 [Polymorphum gilvum SL003B-26A1]
Swissprot	tr\|O65782\|C83B1_ARATH	6.00E-148	Cytochrome P450 83B1
trEMBL	tr\|I1J6H2\|I1J6H2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G17330.1}

Sequence

Transcript Sequence

>Glyur003012s00040775.1
ATCATATCCAAACTCTATCTATTGTCATCTTTAGTGTCAATAGGTGTTATATGTGTGTCTGTATGGGATGAGATTACAATAGCACTAAATTCATGATGGACCAAAACATGTTACCACTGGTTCTGTTAGTTTTTCCTCTCTTGCTATTGTTCATCTTCCAAAAACACAAAACATCAAAGAAGAAGCCAAACATTCCACCAGGCCCCAGAGGCCTTCCCTTCATTGGCAATCTACACCAACTCAATAGTTCATCTCTTCATCTGAACCTCTACGAGCTCTCAAAGAAACATGGCTCCTTGTTTTCCCTTAAACTCGGTTCAAGGCAAGCAATCGTGGTTTCTTCAGCTGAAATGGCCAAAGAGGTAACAAAAACCCACGACATCGACTTCTGTAGCCGACCCTCCTTCATAAGCCAAATGAAGTTCTCATACAATGGACTAGACATGATTTTTTCACCCTACAGAGATTACTGGAGACACACGAGGAAACTCTCCATCGTCCATTTCCTTAGCCTCAAGCGTGTCTTAGCATTTTCCTCGGTTAGAAAATATGAGGTATGTCAAATGATGAAGAAGATAACCGAACACGCTTCTTGCTCCAACAAAGCTACCAACTTGCATGAGTTGCTGACGTGTCTCACTACTACAATAGTTTGTAGGACCGCGTTTGGAAGAAGGTATGAGGAAGAAGGAATTGAGAAAAGCATGTTCCATGGGTTGTTTAGAGAGGCGCTGGAGTTGATAGTTTCCTTCTTTTATGAGGATTATTTCCCACTTTTTGGGGGAATTGTTGATAAATATTTCACTGGGATGACGGGTCGACTTGAGAAGATGTTCAAGGTGCTTGATGGGTTTTTTCAGGGTATTATTGATGAACACCTTGATCCTGAAAAGAGGAAAAAACTACCTGCAGATCATGAAGAGGATGTAATTGATGCCTTGCTTCAGTTGAAGAACGATCCTTCCTTCTCCATGGATCTCACTCCTGATCACATCAAACCTCTCATCATGAATATGATAGTGGCGGGGTCAGATTCAAGTGCATCTGTAATAGCTTGGGCCATGACAGCACTAATGAAGAACCCTCAAGTAATGCAGAAAGCACAAGAAGAGATCANAAACATGTTCGGAAGGAATAAAGGGAAAGACTTCATAGAGGAACCCGATGTCCAAAAGCTCCCTTATTTGAAGGCAGTGATAAAAGAAACAATGAGAATGTACCCGCCACTACCACTCCTCATAACAAGAGAAACGAGGAACAGGTGTCACATAGCAGGGTACGNGGTTCCAGAGANGACANTGGTGTATGTGAATGCTTGGGCAGTACATAGAGACCCTGAGAAATGGAAGGACCCNGAAGAGTTNTGTCCTGAGAGGTTCCTAGAGAGTGATATAGATTTCAGGGGACATGATTTTGAGCTGATTCCATTTGGTACAGGAAGAAGGATTTGCCCCGGGATACACATGGGGGTTGCTACTGTGGAGNTTGTNCTNGCTAATCTTCTCTATTCGTTTGATTGGGAAATGCCTCAAGGAACAAAGAGGGAAGACATTGACACTGAAGTGCTTCCTGGACTTATCCAACACAAGAAACACCCTCTCTGCCTTGTTGCTAAGAAGCGATTTAATTGAATGTGTGATTATAGGGACATGTTATTATAATAGTAATTTGAAAATAAATACCAACATGATACGATTCGGGTGGTAGATACCCATGTCCCTTAAGCACACTGGTATCTCAGGCTGTGTGAACAAAAGACTATGCATATATATGTTGAGAGATATCGACTTCTTAAATGAATATATCTTAGTGCCTCGAGGATTAGTCTCTGTAGTTGCATGTGAATGATAACCAGTGAAAAAAAATAAAAAAAAAGGAAATGGAGTGTTATATATGGTGAAACAATTACATATATGGATGAAAATAGATTTGAGTCTCCATG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold03012	13550	16708	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP83B1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003012s00040775.1	PF00067.17	p450	35	499	3.50E-102

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.741
SRR1783600	control	1.610
SRR1783602	moderate drought stress	4.667
SRR1811619	moderate drought stress	4.522

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	19.067
DRR006520	Root Summer glycyrrhizin high producing strain	18.895
DRR006521	Root Winter glycyrrhizin high producing strain	31.872
DRR006522	Root Winter glycyrrhizin high producing strain	30.225
DRR006523	Root Summer glycyrrhizin low producing strain	24.889
DRR006524	Root Summer glycyrrhizin low producing strain	24.169
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.072
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.024

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	10.057
SRR2868004	Drought Stress (root)	21.214
SRR2967015	Control (root)	29.379

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.104
SRR9715740	Leaf	0.295
SRR9715741	Leaf	3.104
SRR9715739	Root	0.014
SRR9715742	Root	0.032
SRR9715743	Root	0.057

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.073
SRR8749028	MeJA induced 9h	3.300
SRR8749029	MeJA induced 9h	0.134
SRR8749030	Uninduced	0.442
SRR8749031	Uninduced	0.099
SRR8749032	Uninduced	0.603

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.168
SRR8400027	Control - Root	0.743