Gene detail

Gene detail information of Glyur003011s00033767.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G02020.1	0	SET domain-containing protein
NR	XP_004495901.1	0	PREDICTED: histone-lysine N-methyltransferase EZA1-like [Cicer arietinum]
COG	YP_002763429.1	7.00E-11	hypothetical protein GAU_3917 [Gemmatimonas aurantiaca T-27]
Swissprot	tr\|Q9ZSM8\|EZA1_ARATH	0	Histone-lysine N-methyltransferase EZA1
trEMBL	tr\|K7LGU2\|K7LGU2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G01580.3}

Sequence

Transcript Sequence

>Glyur003011s00033767.1
CTTCTTCTTCTTACTGTGATCAACTCGCTCGGCGTGGCGTAGCAGAAGAATAACATCCATGGTCTCCAAACCTACCGATTCTGCTCCCAAACTTCACCGAAAACAGCATGGAGAGACAACAAGTGATGCTGTCGGAACCTTGTCCACGAAGATAAATCAGTTGAAAAAGCAAATCCAGGCGGAGAGAATTGCATCCGTTAAAGAAAAAATTCAGAGGAACCAGGAGAAGCTACAATGCCATATTTCAGGAGTCATGTCAGCAATATCAACCAGGGACTCTTCACAGACCGAGGAAAATAGGACACGTTCAATTCTTTCTTCAAGAATGGANGATCCTTTATGTAAATTTAGTGGTTTTACTCAAGGTTCAGGAGACAAAGACCACAGCAATCCAGACATGTTATCTGTTACAAGTATAAAGATTCCATATATTGAAAGATTACCACCATATACATCTTGGATATTTTTGGACAGAAATCAGAGAATGGCCGATGATCAGTCAGTTGTNGGAAGAAGACGTATCTACTATGATCAACATGGAAGCGAAGCATTGATATGTAGTGACAGTGAGGAAGAGTTAACAGAACCTGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGACCGTGTTTTATGGATGGCATTTGAGGAACATGGGTTAAATGAGGAGGTATTGAGTGTTGTTAGCAAGTTTGTTGGGGGCACCAGTTTAGAAATTCAGGAGAGGTACAAAAGAATCAAGGAAAATGGTAGGTTGGACCAGCATTCAGAAGTATCAGGAGAACATGAATCTTCTATTGCCATGTATCCAGAGAAAAGTCTGAGTGCTGCATTAGATTCTTTTGATAACCTTTTCTGTCGCCGTTGCCTGATTTTTGACTGTCGTCTGCATGGCTGTTCTCAACCTTTGATATATCCTAGTGAAAAGCAGTCAGATTGGTCTGAGCCTGAAGGTGATAGGAAACCATGCAGTGATCAGTGTTACCTTCAGCAGTTAAAGGTTGTCAAAAGTTTGTCAGAAGATTCAACTCCCAGGTCTTTTCAGGATAAGAAAACTACAATTGTAGAGGAGGCAGATGGGAAATTAGCACCATCCAGTGCAGAGGAACCTGACAATCAGTGTACTACACTCGTGACAGTTGAGCGTCATGGATATCTCAATTTAAATGTTCCCGTCTCAGAAAATTTTGGGAAACGAAAGGTCACAAAGCAGTCAGACACAGCACTATGTGACTCAACATTGCCTCCTGATGATTCTCAGAATTCTTGTAAAAAGCTGAAGAGAATCTCTGATGATGTAGTTACGGTAACTAGTGATTATAGCAAGAACCTAAATTTGGGTTCATCTGATGAAAATAGACATATAATTACTTGNTCAATTTTGGACAAATCTGTTGAACATACTTCAAATAAATTAATAGTTCCTTCTAGCACTTGCCATGATGAGCACAACAAAAATGTCNGGGATGGACCAAAAGCTGTCACAAATGAGACAGAACTTAAAACATTGTTTGATTCAATGGAAGGACAAGTTGATGGAATGCCAAGTTTCTCAGATTGGAAACCTCTAGAGAAAGAGNTATACTTGAAGGGAGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCTAGGAACTTACTTTCTGGTTTGAAGACTTGCATGGAAATAGCTAGTTACATGTATGCTGGAGGAGTATCGATGCCCCACAGATCTATTGTTGCACCTAGTTCAATCATGGACGACAAGGGAAAATTTGACACAGAGTGCACAGACCAAGACGTTCCATCTAGGTCACGGATGCTGAGGAAAAGGGGCAANACAAGGAAGTTTAAATATTCTTGGAAGTCTGCTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACACCATGTGGATGTCAATCAATGTGTGGAAAGGAATGTTCTTGTATTAATGGTGGAACTTGCTGTGAAAAATATTGTGGTTGTTCCAAGAGNTGCAAAAACCGGTTCAGAGGCTGCCATTGTGCCAAGAGTCAATGTAGAAGTCGACAATGCCCATGCTTTGCTGCTGGACGTGAATGTGACCCAGATGTCTGTCGAAATTGCTGGGTTAGCTGTGGGGATGGTTCGTTAGGGGAGCCAACACGGCGTGGAGAAGGTCAATGTGGCAATATGAGGCTTCTTTTAAGGCAACAGCAGAGGATTCTCTTGGCAAAGTCTGATGTTGCAGGATGGGGAGCTTTCTTAAAGAATCCTGTCAACAAAAATGATTACCTAGGAGAGTACACAGGTGAACTGATCTCCCATCGAGAAGCCGATAAGCGTGGAAAAATATACGATCGTGCTAATTCATCTTTCCTTTTTGATTTGAATGAGCAGGCATGTGTCTTGCATCATCTACATTTTCTCTTAACTTGGACCTTANAGCTGCTTTCTGTTCCTTCACAGTATGTTCTTGATGCTTATCGCAAAGGAGACAAATTGAAATTTGCAAACCACTCATCAAACCCCAACTGNTATGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTTGCCAAGGAACACATTGATGCAAGTGAGGAGCTCTTCTATGATTATCGCTATGGTCCAGATCAAGCACCCCCATGGGCTCGTAGACCTGAGGGTTCCAAGAGAGACGAATCAGCAGTTTCTCAAGGCAGAGCAAAGAAACACCAGTCTCATTGATGAGCCATGGTCCAGGTCCGGCATGTACAAATTTTTGCTCAACAGACACGAACTTGTGACGCATCCGACGGTAAAGACTGAAGCAACTGTCACTGAAGAAGGGAACCAGTAATTGGTATGCAGATGCTAATATGCCTTAAATTATGGATACGGCACAGTTAGACAATAAAATGGGCAAGAGATTAAACAAATATTGAGGGAAATAAGCTAGAAATTAGCCTAGCAGTTGGTAACAGAAGCATAGAATTTCCTTTTGGATGCCAGAAATATATGTTCTTCCACGCATTTGCTAATTTGGCATAATTTTTTCATGAATAAGATAAATCTTGCTAATAGTGAACACACACACACACACACACTCAATCTATCTAGTGTAATGGGACTTAAATGCAACAGAGTTTCAAATTTGGAAACTCACTTTATAGGGGGATTATACCTAATTACCACCTCCACCCAGAGTGGTATGAGCAATTGC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold03011	12024	20992	-

Gene family

Gene family	subfamily
Transcription Factors Family	SET

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K11430	EZH2	EC:2.1.1.43	Lysine degradation	map00310
			Lysine degradation	map00310
			MicroRNAs in cancer	map05206
			MicroRNAs in cancer	map05206

Gene Ontology

cellular_component
GO:0031519 PcG protein complex

molecular_function

GO:0003682 chromatin binding

GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003011s00033767.1	PF00856.23	SET	728	854	8.60E-12

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	27.292
SRR1783600	control	27.506
SRR1783602	moderate drought stress	33.873
SRR1811619	moderate drought stress	33.609

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	39.493
DRR006520	Root Summer glycyrrhizin high producing strain	38.913
DRR006521	Root Winter glycyrrhizin high producing strain	36.819
DRR006522	Root Winter glycyrrhizin high producing strain	35.818
DRR006523	Root Summer glycyrrhizin low producing strain	39.364
DRR006524	Root Summer glycyrrhizin low producing strain	39.504
DRR006525	Leaf Summer glycyrrhizin high producing strain	18.748
DRR006526	Leaf Summer glycyrrhizin high producing strain	18.547

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	37.049
SRR2868004	Drought Stress (root)	53.649
SRR2967015	Control (root)	48.967

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	21.575
SRR9715740	Leaf	23.988
SRR9715741	Leaf	31.867
SRR9715739	Root	1.958
SRR9715742	Root	13.821
SRR9715743	Root	10.730

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	31.177
SRR8749028	MeJA induced 9h	34.453
SRR8749029	MeJA induced 9h	31.168
SRR8749030	Uninduced	31.661
SRR8749031	Uninduced	25.131
SRR8749032	Uninduced	21.989

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	43.358
SRR8400027	Control - Root	40.348