Gene detail information of Glyur003011s00033766 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G16760.1 | 2.00E-56 | Calcium-dependent phosphotriesterase superfamily protein |
| NR | AFK40532.1 | 9.42E-99 | unknown [Lotus japonicus] |
| COG | YP_003389858.1 | 4.00E-19 | SMP-30/gluconolaconase/LRE domain-containing protein [Spirosoma linguale DSM 74] |
| trEMBL | tr|I3SJU0|I3SJU0_LOTJA | 4.00E-99 | Uncharacterized protein {ECO:0000313|EMBL:AFK40532.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03011 | 9110 | 11479 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.983 |
| SRR1783600 | control | 16.010 |
| SRR1783602 | moderate drought stress | 11.982 |
| SRR1811619 | moderate drought stress | 11.976 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.606 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.020 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.848 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.819 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.248 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.106 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.482 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 62.815 |
| SRR2868004 | Drought Stress (root) | 30.166 |
| SRR2967015 | Control (root) | 32.894 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.803 |
| SRR9715740 | Leaf | 6.584 |
| SRR9715741 | Leaf | 4.399 |
| SRR9715739 | Root | 48.493 |
| SRR9715742 | Root | 20.640 |
| SRR9715743 | Root | 25.659 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.745 |
| SRR8749028 | MeJA induced 9h | 2.397 |
| SRR8749029 | MeJA induced 9h | 3.409 |
| SRR8749030 | Uninduced | 1.701 |
| SRR8749031 | Uninduced | 0.332 |
| SRR8749032 | Uninduced | 1.145 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 66.816 |
| SRR8400027 | Control - Root | 62.448 |