Gene detail information of Glyur003010s00040926 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17690.1 | 9.00E-118 | |
| NR | XP_003533727.1 | 0 | PREDICTED: U3 small nucleolar RNA-associated protein 25-like [Glycine max] |
| trEMBL | tr|I1L1B7|I1L1B7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G06450.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03010 | 420 | 8524 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003010s00040926.1 | PF06862.7 | DUF1253 | 1 | 338 | 1.10E-107 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.715 |
| SRR1783600 | control | 4.759 |
| SRR1783602 | moderate drought stress | 3.901 |
| SRR1811619 | moderate drought stress | 3.883 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.482 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.733 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.317 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.810 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.578 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.395 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.092 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.220 |
| SRR2868004 | Drought Stress (root) | 12.106 |
| SRR2967015 | Control (root) | 10.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.601 |
| SRR9715740 | Leaf | 8.225 |
| SRR9715741 | Leaf | 11.103 |
| SRR9715739 | Root | 1.684 |
| SRR9715742 | Root | 7.597 |
| SRR9715743 | Root | 6.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 29.664 |
| SRR8749028 | MeJA induced 9h | 8.805 |
| SRR8749029 | MeJA induced 9h | 18.875 |
| SRR8749030 | Uninduced | 6.741 |
| SRR8749031 | Uninduced | 4.805 |
| SRR8749032 | Uninduced | 6.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.089 |
| SRR8400027 | Control - Root | 12.624 |