Gene detail information of Glyur003003s00038994 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G56490.1 | 8.00E-52 | HIS triad family protein 3 |
| NR | XP_004489633.1 | 1.12E-87 | PREDICTED: 14 kDa zinc-binding protein-like [Cicer arietinum] |
| COG | YP_007120741.1 | 1.00E-37 | HIT family hydrolase, diadenosine tetraphosphate hydrolase [Microcoleus sp. PCC 7113] |
| Swissprot | tr|P42856|ZB14_MAIZE | 5.00E-71 | 14 kDa zinc-binding protein |
| trEMBL | tr|V7C2I4|V7C2I4_PHAVU | 1.00E-86 | Uncharacterized protein {ECO:0000313|EMBL:ESW23505.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03003 | 21569 | 24842 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003003s00038994.1 | PF01230.18 | HIT | 46 | 143 | 1.70E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 100.232 |
| SRR1783600 | control | 101.315 |
| SRR1783602 | moderate drought stress | 85.076 |
| SRR1811619 | moderate drought stress | 84.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 167.688 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 167.449 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 91.039 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 84.842 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 159.613 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 163.266 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 63.044 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 62.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 51.326 |
| SRR2868004 | Drought Stress (root) | 53.354 |
| SRR2967015 | Control (root) | 43.607 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 53.323 |
| SRR9715740 | Leaf | 42.719 |
| SRR9715741 | Leaf | 60.428 |
| SRR9715739 | Root | 38.225 |
| SRR9715742 | Root | 39.893 |
| SRR9715743 | Root | 39.583 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 32.033 |
| SRR8749028 | MeJA induced 9h | 33.107 |
| SRR8749029 | MeJA induced 9h | 29.545 |
| SRR8749030 | Uninduced | 33.563 |
| SRR8749031 | Uninduced | 15.455 |
| SRR8749032 | Uninduced | 32.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 48.971 |
| SRR8400027 | Control - Root | 44.563 |