Gene detail information of Glyur003003s00038993 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003618913.1 | 5.20E-55 | hypothetical protein MTR_6g026830 [Medicago truncatula] |
| trEMBL | tr|G7KP67|G7KP67_MEDTR | 2.00E-55 | Uncharacterized protein {ECO:0000313|EMBL:AES75131.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03003 | 18674 | 19057 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.037 |
| SRR1783600 | control | 3.508 |
| SRR1783602 | moderate drought stress | 3.161 |
| SRR1811619 | moderate drought stress | 2.986 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.325 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.581 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.402 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 27.464 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.653 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.206 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.920 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.160 |
| SRR2868004 | Drought Stress (root) | 3.766 |
| SRR2967015 | Control (root) | 3.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.008 |
| SRR9715740 | Leaf | 1.307 |
| SRR9715741 | Leaf | 1.114 |
| SRR9715739 | Root | 1.032 |
| SRR9715742 | Root | 0.161 |
| SRR9715743 | Root | 1.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.309 |
| SRR8749028 | MeJA induced 9h | 61.309 |
| SRR8749029 | MeJA induced 9h | 38.506 |
| SRR8749030 | Uninduced | 23.543 |
| SRR8749031 | Uninduced | 45.495 |
| SRR8749032 | Uninduced | 38.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.175 |
| SRR8400027 | Control - Root | 8.428 |