Gene detail information of Glyur003003s00038991 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007151506.1 | 1.77E-35 | hypothetical protein PHAVU_004G052600g [Phaseolus vulgaris] |
| trEMBL | tr|V7C2H8|V7C2H8_PHAVU | 7.00E-36 | Uncharacterized protein {ECO:0000313|EMBL:ESW23500.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03003 | 10271 | 11443 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 215.791 |
| SRR1783600 | control | 223.491 |
| SRR1783602 | moderate drought stress | 178.659 |
| SRR1811619 | moderate drought stress | 181.884 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.302 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.672 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.188 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.183 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.059 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.048 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.730 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.804 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.531 |
| SRR2868004 | Drought Stress (root) | 3.322 |
| SRR2967015 | Control (root) | 3.597 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.267 |
| SRR9715740 | Leaf | 0.779 |
| SRR9715741 | Leaf | 0.376 |
| SRR9715739 | Root | 6.506 |
| SRR9715742 | Root | 8.702 |
| SRR9715743 | Root | 9.355 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.698 |
| SRR8749028 | MeJA induced 9h | 3.135 |
| SRR8749029 | MeJA induced 9h | 0.510 |
| SRR8749030 | Uninduced | 1.121 |
| SRR8749031 | Uninduced | 0.256 |
| SRR8749032 | Uninduced | 0.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 72.533 |
| SRR8400027 | Control - Root | 69.503 |