Gene detail information of Glyur003000s00038029 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003601452.1 | 9.02E-30 | hypothetical protein MTR_3g080860 [Medicago truncatula] |
| trEMBL | tr|G7J806|G7J806_MEDTR | 3.00E-30 | Uncharacterized protein {ECO:0000313|EMBL:AES71703.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03000 | 20121 | 20699 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 43.554 |
| SRR1783600 | control | 46.279 |
| SRR1783602 | moderate drought stress | 34.590 |
| SRR1811619 | moderate drought stress | 35.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 82.177 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 81.038 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 294.288 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 293.897 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 89.254 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 87.823 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.891 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.542 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.346 |
| SRR2868004 | Drought Stress (root) | 4.106 |
| SRR2967015 | Control (root) | 4.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 39.179 |
| SRR9715740 | Leaf | 39.937 |
| SRR9715741 | Leaf | 43.842 |
| SRR9715739 | Root | 34.551 |
| SRR9715742 | Root | 37.980 |
| SRR9715743 | Root | 36.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 108.512 |
| SRR8749028 | MeJA induced 9h | 138.765 |
| SRR8749029 | MeJA induced 9h | 113.047 |
| SRR8749030 | Uninduced | 46.958 |
| SRR8749031 | Uninduced | 49.520 |
| SRR8749032 | Uninduced | 74.901 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 44.594 |
| SRR8400027 | Control - Root | 66.025 |