Gene detail information of Glyur003000s00038028 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G64640.1 | 3.00E-26 | early nodulin-like protein 8 |
| NR | XP_003542158.1 | 2.88E-75 | PREDICTED: early nodulin-like protein 3-like [Glycine max] |
| Swissprot | tr|Q9SK27|ENL1_ARATH | 3.00E-09 | Early nodulin-like protein 1 (Precursor) |
| trEMBL | tr|I1LXI9|I1LXI9_SOYBN | 1.00E-75 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G10460.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03000 | 18388 | 19225 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003000s00038028.1 | PF02298.12 | Cu_bind_like | 63 | 108 | 1.60E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 29.498 |
| SRR1783600 | control | 30.037 |
| SRR1783602 | moderate drought stress | 11.829 |
| SRR1811619 | moderate drought stress | 12.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 36.328 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 35.242 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 219.503 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 216.467 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.623 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.581 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.054 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.240 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.884 |
| SRR2868004 | Drought Stress (root) | 1.752 |
| SRR2967015 | Control (root) | 1.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.430 |
| SRR9715740 | Leaf | 1.675 |
| SRR9715741 | Leaf | 0.138 |
| SRR9715739 | Root | 2.691 |
| SRR9715742 | Root | 0.810 |
| SRR9715743 | Root | 1.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.987 |
| SRR8749028 | MeJA induced 9h | 30.483 |
| SRR8749029 | MeJA induced 9h | 16.936 |
| SRR8749030 | Uninduced | 44.396 |
| SRR8749031 | Uninduced | 14.687 |
| SRR8749032 | Uninduced | 33.681 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.564 |
| SRR8400027 | Control - Root | 16.157 |