Gene detail information of Glyur003000s00038026 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10770.1 | 7.00E-82 | oligopeptide transporter 7 |
| NR | AES71704.2 | 3.96E-114 | oligopeptide transporter OPT family protein [Medicago truncatula] |
| Swissprot | tr|O82485|OPT7_ARATH | 7.00E-95 | Oligopeptide transporter 7 |
| trEMBL | tr|G7J807|G7J807_MEDTR | 1.00E-114 | Oligopeptide transporter OPT family protein {ECO:0000313|EMBL:AES71704.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03000 | 12850 | 15371 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003000s00038026.1 | PF03169.10 | OPT | 4 | 145 | 1.30E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.617 |
| SRR1783600 | control | 0.954 |
| SRR1783602 | moderate drought stress | 0.834 |
| SRR1811619 | moderate drought stress | 0.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.229 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.294 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.058 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.055 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.134 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.174 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.660 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.841 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.924 |
| SRR2868004 | Drought Stress (root) | 3.564 |
| SRR2967015 | Control (root) | 4.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.796 |
| SRR9715740 | Leaf | 1.663 |
| SRR9715741 | Leaf | 1.079 |
| SRR9715739 | Root | 0.212 |
| SRR9715742 | Root | 0.057 |
| SRR9715743 | Root | 0.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.447 |
| SRR8749029 | MeJA induced 9h | 0.162 |
| SRR8749030 | Uninduced | 0.355 |
| SRR8749031 | Uninduced | 0.423 |
| SRR8749032 | Uninduced | 0.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.291 |
| SRR8400027 | Control - Root | 0.719 |