Gene detail information of Glyur003000s00038023 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G05200.1 | 8.00E-30 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25 |
| NR | XP_006606023.1 | 4.38E-96 | PREDICTED: cysteine-rich receptor-like protein kinase 10-like isoform X2 [Glycine max] |
| Swissprot | tr|Q9M0X5|CRK25_ARATH | 9.00E-42 | Cysteine-rich receptor-like protein kinase 25 (Precursor) |
| trEMBL | tr|K7N3D7|K7N3D7_SOYBN | 6.00E-97 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G27660.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03000 | 2209 | 3714 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003000s00038023.1 | PF01657.12 | Stress-antifung | 35 | 133 | 1.40E-21 |
| Glyur003000s00038023.1 | PF01657.12 | Stress-antifung | 164 | 251 | 8.00E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.083 |
| SRR1783600 | control | 0.890 |
| SRR1783602 | moderate drought stress | 1.944 |
| SRR1811619 | moderate drought stress | 2.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.029 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.971 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.252 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.369 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.360 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.584 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.630 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.419 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.568 |
| SRR2868004 | Drought Stress (root) | 4.017 |
| SRR2967015 | Control (root) | 2.579 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.858 |
| SRR9715740 | Leaf | 0.647 |
| SRR9715741 | Leaf | 3.801 |
| SRR9715739 | Root | 0.112 |
| SRR9715742 | Root | 0.416 |
| SRR9715743 | Root | 0.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.348 |
| SRR8749028 | MeJA induced 9h | 10.997 |
| SRR8749029 | MeJA induced 9h | 3.853 |
| SRR8749030 | Uninduced | 6.541 |
| SRR8749031 | Uninduced | 9.272 |
| SRR8749032 | Uninduced | 8.766 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.678 |
| SRR8400027 | Control - Root | 1.723 |