Gene detail information of Glyur002979s00043727 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G22110.1 | 4.00E-26 | structural constituent of ribosome |
| NR | XP_004490368.1 | 1.65E-54 | PREDICTED: protein FANTASTIC FOUR 1-like [Cicer arietinum] |
| trEMBL | tr|G7KA05|G7KA05_MEDTR | 4.00E-49 | DUF3049 family protein {ECO:0000313|EMBL:AES97907.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02979 | 10752 | 11441 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002979s00043727.1 | PF11250.3 | DUF3049 | 54 | 113 | 2.60E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.281 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.217 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.428 |
| SRR2868004 | Drought Stress (root) | 0.945 |
| SRR2967015 | Control (root) | 0.455 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.440 |
| SRR9715739 | Root | 0.534 |
| SRR9715742 | Root | 0.084 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.947 |
| SRR8749028 | MeJA induced 9h | 71.987 |
| SRR8749029 | MeJA induced 9h | 83.761 |
| SRR8749030 | Uninduced | 24.764 |
| SRR8749031 | Uninduced | 59.510 |
| SRR8749032 | Uninduced | 59.685 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.051 |
| SRR8400027 | Control - Root | 0.184 |