Gene detail information of Glyur002961s00038601 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G51740.1 | 7.00E-54 | Peptidase family M48 family protein |
| NR | XP_007152386.1 | 4.40E-98 | hypothetical protein PHAVU_004G125600g [Phaseolus vulgaris] |
| trEMBL | tr|V7C523|V7C523_PHAVU | 2.00E-98 | Uncharacterized protein {ECO:0000313|EMBL:ESW24380.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02961 | 12861 | 16946 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.511 |
| SRR1783600 | control | 0.483 |
| SRR1783602 | moderate drought stress | 1.279 |
| SRR1811619 | moderate drought stress | 1.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.387 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.263 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.253 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.107 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.763 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.201 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.236 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.802 |
| SRR2868004 | Drought Stress (root) | 5.398 |
| SRR2967015 | Control (root) | 4.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.547 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.337 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.704 |
| SRR8749028 | MeJA induced 9h | 3.936 |
| SRR8749029 | MeJA induced 9h | 3.493 |
| SRR8749030 | Uninduced | 3.902 |
| SRR8749031 | Uninduced | 2.818 |
| SRR8749032 | Uninduced | 1.908 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.623 |
| SRR8400027 | Control - Root | 2.603 |