Gene detail information of Glyur002959s00043117 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | ACU14401.1 | 1.26E-10 | unknown [Glycine max] |
| trEMBL | tr|C6SYS8|C6SYS8_SOYBN | 5.00E-11 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU14401.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02959 | 12127 | 12494 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1839.397 |
| SRR1783600 | control | 1241.746 |
| SRR1783602 | moderate drought stress | 1038.531 |
| SRR1811619 | moderate drought stress | 1036.856 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 485.545 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 467.008 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1529.185 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1531.998 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 328.385 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 333.069 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.613 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.287 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 37.090 |
| SRR2868004 | Drought Stress (root) | 20.776 |
| SRR2967015 | Control (root) | 26.497 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.100 |
| SRR9715740 | Leaf | 0.026 |
| SRR9715741 | Leaf | 0.253 |
| SRR9715739 | Root | 326.488 |
| SRR9715742 | Root | 187.232 |
| SRR9715743 | Root | 221.917 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.102 |
| SRR8749028 | MeJA induced 9h | 2.655 |
| SRR8749029 | MeJA induced 9h | 19.504 |
| SRR8749030 | Uninduced | 0.162 |
| SRR8749031 | Uninduced | 1.034 |
| SRR8749032 | Uninduced | 1.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 166.084 |
| SRR8400027 | Control - Root | 163.691 |