Gene detail information of Glyur002932s00039304 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G49720.2 | 4.00E-106 | |
| NR | XP_004509050.1 | 2.33E-162 | PREDICTED: uncharacterized protein At3g49720-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9M2Y6|Y3972_ARATH | 4.00E-133 | Uncharacterized protein At3g49720 |
| trEMBL | tr|A0A072UNX2|A0A072UNX2_MEDTR | 3.00E-159 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH31539.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02932 | 17209 | 22145 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.044 |
| SRR1783600 | control | 16.093 |
| SRR1783602 | moderate drought stress | 7.198 |
| SRR1811619 | moderate drought stress | 7.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.453 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.990 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 48.497 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 47.128 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 48.224 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 47.510 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.231 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.840 |
| SRR2868004 | Drought Stress (root) | 15.718 |
| SRR2967015 | Control (root) | 13.944 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.001 |
| SRR9715740 | Leaf | 11.402 |
| SRR9715741 | Leaf | 15.092 |
| SRR9715739 | Root | 9.775 |
| SRR9715742 | Root | 19.964 |
| SRR9715743 | Root | 17.884 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 98.201 |
| SRR8749028 | MeJA induced 9h | 75.941 |
| SRR8749029 | MeJA induced 9h | 92.385 |
| SRR8749030 | Uninduced | 68.204 |
| SRR8749031 | Uninduced | 10.985 |
| SRR8749032 | Uninduced | 23.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.390 |
| SRR8400027 | Control - Root | 19.756 |