Gene detail information of Glyur002931s00046905 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G09730.1 | 3.00E-06 | RH39 |
| NR | XP_006599462.1 | 5.23E-29 | PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Glycine max] |
| Swissprot | tr|Q5VRY0|RH39_ORYSJ | 1.00E-08 | DEAD-box ATP-dependent RNA helicase 39 |
| trEMBL | tr|I1MP19|I1MP19_SOYBN | 2.00E-29 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G27680.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02931 | 15711 | 26407 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.033 |
| SRR1783600 | control | 2.085 |
| SRR1783602 | moderate drought stress | 4.186 |
| SRR1811619 | moderate drought stress | 4.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.955 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.447 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.102 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.666 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.692 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.292 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.218 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.897 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.385 |
| SRR2868004 | Drought Stress (root) | 3.288 |
| SRR2967015 | Control (root) | 3.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.593 |
| SRR9715740 | Leaf | 4.493 |
| SRR9715741 | Leaf | 2.731 |
| SRR9715739 | Root | 0.502 |
| SRR9715742 | Root | 2.224 |
| SRR9715743 | Root | 2.449 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.672 |
| SRR8749028 | MeJA induced 9h | 1.113 |
| SRR8749029 | MeJA induced 9h | 0.238 |
| SRR8749030 | Uninduced | 0.593 |
| SRR8749031 | Uninduced | 0.058 |
| SRR8749032 | Uninduced | 0.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.913 |
| SRR8400027 | Control - Root | 2.642 |