Gene detail information of Glyur002921s00040294 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12910.1 | 1.00E-43 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
| NR | KHN27713.1 | 2.64E-101 | NAC domain-containing protein 42 [Glycine soja] |
| Swissprot | tr|Q9SK55|NAC42_ARATH | 4.00E-52 | Transcription factor JUNGBRUNNEN 1 |
| trEMBL | tr|C6TGY8|C6TGY8_SOYBN | 1.00E-101 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G40950.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02921 | 16443 | 19330 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002921s00040294.1 | PF02365.10 | NAM | 11 | 88 | 2.60E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.922 |
| SRR1783600 | control | 2.085 |
| SRR1783602 | moderate drought stress | 3.567 |
| SRR1811619 | moderate drought stress | 3.671 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.215 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.214 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.907 |
| SRR2868004 | Drought Stress (root) | 4.524 |
| SRR2967015 | Control (root) | 2.657 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.775 |
| SRR9715740 | Leaf | 0.213 |
| SRR9715741 | Leaf | 0.690 |
| SRR9715739 | Root | 2.344 |
| SRR9715742 | Root | 2.249 |
| SRR9715743 | Root | 0.983 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.007 |
| SRR8749028 | MeJA induced 9h | 0.588 |
| SRR8749029 | MeJA induced 9h | 0.350 |
| SRR8749030 | Uninduced | 1.006 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.098 |
| SRR8400027 | Control - Root | 3.349 |